RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CAMKK1Q8N5S9 505 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 ZKSCAN4Q969J2 545 aaPredicted RBP16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 AHSPQ9NZD4 102 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 TIMM44O43615 452 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 EPHX2P34913 555 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 ERFP50548 548 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 ACOT1Q86TX2 421 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 ZNF711Q9Y462 761 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 EIF4E1BA6NMX2 242 aaKnown RBP16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 TBKBP1A7MCY6 615 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 B2RBV5 119 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 E9PBE3 544 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 SAMD3Q8N6K7 520 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 KLF6Q99612 283 aaPredicted RBP16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 KLHL28Q9NXS3 571 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 FBXO10Q9UK96 956 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 NFICP08651 508 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 CTCFP49711 727 aaPredicted RBP16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 MMP14P50281 582 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 VSNL1P62760 191 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 C19orf60Q96EN9 201 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 ENDOD1O94919 500 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 KLRC2P26717 231 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 NLRP9Q7RTR0 991 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 ANKRD65E5RJM6 399 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 XYLBO75191 536 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 HALP42357 657 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 KLC4Q9NSK0 619 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 RPS6KL1Q9Y6S9 549 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 NFIBO00712 420 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 ZBTB39O15060 712 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 NBPF15Q8N660 670 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 FICDQ9BVA6 458 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 MIEF1Q9NQG6 463 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 RGS18Q9NS28 235 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 PPP2R3BQ9Y5P8 575 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 hCG_2014768A0A024R1R8 64 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 CBX4O00257 560 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 PPP1R37O75864 691 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 DNAJB2P25686 324 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 WEE1P30291 646 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 SOX6P35712 828 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 COILP38432 576 aaPredicted RBP16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 ZCCHC2Q9C0B9 1178 aaKnown RBP16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 PLA2G6O60733 806 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 NBNO60934 754 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 GLP2RO95838 553 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 CYP2A7P20853 494 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 ERP27Q96DN0 273 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 TBC1D13Q9NVG8 400 aa16.21■□□□□ 0.19
NUCKS1-201ENST00000367142 TRIM49D1C9J1S8 452 aa16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 KRT77Q7Z794 578 aa16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 DSG4Q86SJ6 1040 aa16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 B3GALNT2Q8NCR0 500 aa16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 IARS2Q9NSE4 1012 aaKnown RBP16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 KLHL20Q9Y2M5 609 aa16.21■□□□□ 0.18
NUCKS1-201ENST00000367142 GSTM1P09488 218 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 PPP2R1BP30154 601 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 COPAP53621 1224 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 TERF2Q15554 542 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 FBXO16Q8IX29 292 aaPredicted RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 C3orf20Q8ND61 904 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SCAF8Q9UPN6 1271 aaKnown RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 ALG6Q9Y672 507 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 A0A087WZ62 844 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CLTBP09497 229 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 NCF4Q15080 339 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 EPC2Q52LR7 807 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF473Q8WTR7 871 aaKnown RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CPB2Q96IY4 423 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 PHACTR1Q9C0D0 580 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 NDOR1Q9UHB4 597 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SPATA31A1Q5TZJ5 1347 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SDR42E2A6NKP2 422 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 STAU1O95793 577 aaKnown RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SLC26A2P50443 739 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 HDDC2Q7Z4H3 204 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SYN2Q92777 582 aaPredicted RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 NSL1Q96IY1 281 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 LRRC40Q9H9A6 602 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SOX13Q9UN79 622 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.2■□□□□ 0.183e-6■■□□□ 14.2
NUCKS1-201ENST00000367142 HPS5Q9UPZ3 1129 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SKAP2O75563 359 aaPredicted RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 VTNP04004 478 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CAP2P40123 477 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 NUDT2P50583 147 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CLCN3P51790 818 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 POMGNT2Q8NAT1 580 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 IGDCC4Q8TDY8 1250 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CGRRF1Q99675 332 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms