RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 LRRN4CLQ8ND94 238 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 JOSD2Q8TAC2 188 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 ACTRT1Q8TDG2 376 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 UBXN4Q92575 508 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 ZNF558Q96NG5 402 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 OXCT2Q9BYC2 517 aaPredicted RBP14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 CWH43Q9H720 699 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 MSRAQ9UJ68 235 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 USTQ9Y2C2 406 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 PCDHA3Q9Y5H8 950 aa14.54□□□□□ -0.08
PDLIM5-203ENST00000359265 PLXNA3P51805 1871 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 OR6C75A6NL08 312 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 H7C4K7 107 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 PGRMC1O00264 195 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 PDE2AO00408 941 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 PAPSS1O43252 624 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 LCP1P13796 627 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 FGFR3P22607 806 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 RFC1P35251 1148 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 SSR1P43307 286 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 MARCKSL1P49006 195 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 MAP3K7CLP57077 242 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 HTRA4P83105 476 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 OGDHQ02218 1023 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 ZNF252P-AS1Q0IIN9 211 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 ADIGQ0VDE8 80 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 ACAP1Q15027 740 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 NFE2Q16621 373 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 CTXN3Q4LDR2 81 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 SLC26A9Q7LBE3 791 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 CPNE8Q86YQ8 564 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 HERC6Q8IVU3 1022 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 SIX6OS1Q8N1H7 587 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 ALG3Q92685 438 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 KRT35Q92764 455 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 TMEM209Q96SK2 561 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 SMOQ99835 787 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 GPR62Q9BZJ7 368 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 UBXN6Q9BZV1 441 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 ZCWPW1Q9H0M4 648 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 SLC28A3Q9HAS3 691 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 DMAP1Q9NPF5 467 aaPredicted RBP14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 STK39Q9UEW8 545 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 MTCH2Q9Y6C9 303 aa14.53□□□□□ -0.08
PDLIM5-203ENST00000359265 DPYSL4O14531 572 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 SART1O43290 800 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 GABBR2O75899 941 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 FBXO21O94952 628 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 MYOGP15173 224 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 PPM1AP35813 382 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 PEX5P50542 639 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 RABGGTBP53611 331 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 RAB30Q15771 203 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 EFHC1Q5JVL4 640 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 LRRC38Q5VT99 294 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 DCAF12L1Q5VU92 463 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 KCNT2Q6UVM3 1135 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 ANKS3Q6ZW76 656 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 RSRC2Q7L4I2 434 aaKnown RBP14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 TMCO2Q7Z6W1 182 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 FIBCD1Q8N539 461 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 EMC1Q8N766 993 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 NAP1L3Q99457 506 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 RAD9AQ99638 391 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 CNPY3Q9BT09 278 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 TMLHEQ9NVH6 421 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 ASNSD1Q9NWL6 643 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 TMEM59LQ9UK28 342 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 TTC7AQ9ULT0 858 aaPredicted RBP14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 GREB1Q4ZG55 1949 aa14.52□□□□□ -0.09
PDLIM5-203ENST00000359265 ZNF638Q14966 1978 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 USP34Q70CQ2 3546 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 C2CD4BA6NLJ0 364 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 NT5C1B-RDH14C9J2C7 533 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 RNF8O76064 485 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 BEST1O76090 585 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 PDGFRAP16234 1089 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 BDNFP23560 247 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 PBX3P40426 434 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 ZNF143P52747 638 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 TAS2R40P59535 323 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 RNASE9P60153 205 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 MRPL58Q14197 206 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 HADHQ16836 314 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 SLC39A12Q504Y0 691 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 CCDC70Q6NSX1 233 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 ARCQ7LC44 396 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 LRRTM3Q86VH5 581 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 SCUBE3Q8IX30 993 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 COLGALT1Q8NBJ5 622 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 ZMIZ2Q8NF64 920 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 RXFP2Q8WXD0 754 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 TMEM169Q96HH4 297 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 FUBP3Q96I24 572 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 IGSF21Q96ID5 467 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms