RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 AGAP1Q9UPQ3 857 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 C17orf102A2RUQ5 167 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 C3orf70A6NLC5 250 aaPredicted RBP14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 LRCH4O75427 683 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 KRT7P08729 469 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 VDRP11473 427 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 GABRB2P47870 512 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 XRCC4Q13426 336 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 GRIK4Q16099 956 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 HADHQ16836 314 aaKnown RBP14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 VSTM1Q6UX27 236 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 ARFGAP1Q8N6T3 406 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 WNT8BQ93098 351 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 NKD2Q969F2 451 aaPredicted RBP14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 MCRS1Q96EZ8 462 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 ACAP3Q96P50 834 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 HIPK3Q9H422 1215 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 ZWILCHQ9H900 591 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 KLC4Q9NSK0 619 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 NOD1Q9Y239 953 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 EFR3BQ9Y2G0 817 aa14.96□□□□□ -0.01
NIPAL3-203ENST00000358028 RALGAPA2Q2PPJ7 1873 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 M0QYV0 167 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 SOX1O00570 391 aaPredicted RBP14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 TREHO43280 583 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 STAU1O95793 577 aaKnown RBP14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 OAS1P00973 400 aaKnown RBP14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 RAG1P15918 1043 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 ARSEP51690 589 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 RBP5P82980 135 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 OASLQ15646 514 aaKnown RBP14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 CCDC38Q502W7 563 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 MARCH8Q5T0T0 291 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 PPP1R21Q6ZMI0 780 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 ARHGEF18Q6ZSZ5 1173 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 ZNF410Q86VK4 478 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 NT5DC4Q86YG4 428 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 TDRPQ86YL5 185 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 GLIS1Q8NBF1 620 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 TET1Q8NFU7 2136 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 CKAP2Q8WWK9 683 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 BADQ92934 168 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 HAUS1Q96CS2 278 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 ADPGKQ9BRR6 497 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 PHACTR1Q9C0D0 580 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 UBN1Q9NPG3 1134 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 DPP3Q9NY33 737 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 C2CD2Q9Y426 696 aa14.96□□□□□ -0.02
NIPAL3-203ENST00000358028 A0A1B0GUA9 196 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 SNX3O60493 162 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 TIMP1P01033 207 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 ITGAVP06756 1048 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 ZSCAN5DPP0CG00 497 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 IL1R2P27930 398 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 CYP2C18P33260 490 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 GRM5P41594 1212 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 MAGEA4P43358 317 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 ADAM17P78536 824 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 INCA1Q0VD86 236 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 MORF4L2Q15014 288 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 EMC1Q8N766 993 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 SLC35B2Q8TB61 432 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 HEXIM2Q96MH2 286 aaKnown RBP14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 ELAC2Q9BQ52 826 aaKnown RBP14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 FAM124BQ9H5Z6 455 aaPredicted RBP14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 EURLQ9NYK6 297 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 TPX2Q9ULW0 747 aaKnown RBP14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 BARX2Q9UMQ3 279 aaPredicted RBP14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 SLC12A4Q9UP95 1085 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 USP15Q9Y4E8 981 aaPredicted RBP14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 CITO14578 2027 aa14.95□□□□□ -0.02
NIPAL3-203ENST00000358028 COL6A3P12111 3177 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 NRCAMQ92823 1304 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 ETS1P14921 441 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 BRAFP15056 766 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 KDELR1P24390 212 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 GPD2P43304 727 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 IFNAR2P48551 515 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 NDST1P52848 882 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 SLC18A1P54219 525 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 GPS1Q13098 491 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 RASA2Q15283 850 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 TAZQ16635 292 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 SMTNL2Q2TAL5 461 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 TRPM8Q7Z2W7 1104 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 TTC39CQ8N584 583 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 GBP7Q8N8V2 638 aaPredicted RBP14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 SGSM3Q96HU1 749 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 RBM15Q96T37 977 aaKnown RBP eCLIP14.94□□□□□ -0.028e-6■■■■□ 19.3
NIPAL3-203ENST00000358028 PCDH9Q9HC56 1237 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 NKIRAS1Q9NYS0 192 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 SHOC2Q9UQ13 582 aa14.94□□□□□ -0.02
NIPAL3-203ENST00000358028 SUN1O94901 812 aa14.93□□□□□ -0.02
NIPAL3-203ENST00000358028 RDXP35241 583 aaKnown RBP14.93□□□□□ -0.02
NIPAL3-203ENST00000358028 CCL23P55773 120 aa14.93□□□□□ -0.02
NIPAL3-203ENST00000358028 ACAP1Q15027 740 aa14.93□□□□□ -0.02
NIPAL3-203ENST00000358028 CCDC142Q17RM4 750 aa14.93□□□□□ -0.02
NIPAL3-203ENST00000358028 DCAF4L1Q3SXM0 396 aa14.93□□□□□ -0.02
NIPAL3-203ENST00000358028 BBS12Q6ZW61 710 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms