RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 CASKIN2Q8WXE0 1202 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 C19orf60Q96EN9 201 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 ISCA1Q9BUE6 129 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 FAM153AQ9UHL3 310 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 FAM25AB3EWG3 89 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 FAM25CB3EWG5 89 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 FAM25GB3EWG6 89 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 HPGDP15428 266 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 STIP1P31948 543 aaKnown RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 KRR1Q13601 381 aaKnown RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 CYB5D1Q6P9G0 228 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 USP49Q70CQ1 688 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 ST13P5Q8NFI4 369 aaPredicted RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 ATP12AP54707 1039 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 EIF2B5Q13144 721 aaKnown RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 OASLQ15646 514 aaKnown RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 SPRTNQ9H040 489 aaPredicted RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 PIPSLA2A3N6 862 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 ENDOD1O94919 500 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 NQO1P15559 274 aaKnown RBP16.59■□□□□ 0.25
RXRA-201ENST00000356384 MYO1HQ8N1T3 1032 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 TPCN2Q8NHX9 752 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 ERAP1Q9NZ08 941 aa16.59■□□□□ 0.25
RXRA-201ENST00000356384 C19orf81C9J6K1 198 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 P4HA2O15460 535 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 PCNAP12004 261 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 TRAF2Q12933 501 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 NFIL3Q16649 462 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 SEZ6Q53EL9 994 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 GLRA4Q5JXX5 417 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 TLK2Q86UE8 772 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 C19orf18Q8NEA5 215 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 PIF1Q9H611 641 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 VTA1Q9NP79 307 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 PADI4Q9UM07 663 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 PIK3C2BO00750 1634 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 GNG14A0A1W2PPG7 69 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 TRIM24O15164 1050 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 TRIM13O60858 407 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 FNTAP49354 379 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 RSBN1Q5VWQ0 802 aaPredicted RBP16.58■□□□□ 0.25
RXRA-201ENST00000356384 PLEKHA7Q6IQ23 1121 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 IGDCC4Q8TDY8 1250 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 ZSWIM1Q9BR11 485 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 DPP3Q9NY33 737 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 GPRC5DQ9NZD1 345 aa16.58■□□□□ 0.25
RXRA-201ENST00000356384 TULP4Q9NRJ4 1543 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 MGAT4DA6NG13 374 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 CNOT3O75175 753 aaKnown RBP16.58■□□□□ 0.24
RXRA-201ENST00000356384 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
RXRA-201ENST00000356384 TYW3Q6IPR3 259 aaKnown RBP16.58■□□□□ 0.24
RXRA-201ENST00000356384 C11orf88Q6PI97 169 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 CCDC126Q96EE4 140 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 DNAJC16Q9Y2G8 782 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 NCAPD2Q15021 1401 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 CUL2Q13617 745 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 KCNT1Q5JUK3 1230 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 C3orf20Q8ND61 904 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 MKNK1Q9BUB5 465 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 SLC26A4O43511 780 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 SNAPC2Q13487 334 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 BFSP2Q13515 415 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 TSGA10IPQ3SY00 556 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 SEL1L3Q68CR1 1132 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 UXS1Q8NBZ7 420 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 PARVBQ9HBI1 364 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
RXRA-201ENST00000356384 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 F5H5T6 163 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 HBP1O60381 514 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 ODC1P11926 461 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 PNPLA4P41247 253 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 ATG16L2Q8NAA4 619 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 PARK7Q99497 189 aaKnown RBP16.57■□□□□ 0.24
RXRA-201ENST00000356384 RGS18Q9NS28 235 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 AAR2Q9Y312 384 aaKnown RBP16.57■□□□□ 0.24
RXRA-201ENST00000356384 PSTPIP1O43586 416 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 SLC2A3P11169 496 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 PEX5P50542 639 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 SNRPFP62306 86 aaKnown RBP16.57■□□□□ 0.24
RXRA-201ENST00000356384 C2CD6Q53TS8 623 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 KLHL31Q9H511 634 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 SPATA2Q9UM82 520 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 KLHL41O60662 606 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 AP1G2O75843 785 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 TALDO1P37837 337 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 AQP5P55064 265 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.57■□□□□ 0.24
RXRA-201ENST00000356384 FAM45BPQ6NSW5 357 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 C16orf62Q7Z3J2 963 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 TBC1D16Q8TBP0 767 aa16.57■□□□□ 0.24
RXRA-201ENST00000356384 USP13Q92995 863 aaPredicted RBP16.57■□□□□ 0.24
RXRA-201ENST00000356384 RNFT2Q96EX2 444 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms