RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 MAPKAPK2P49137 400 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 DCTN2Q13561 401 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ATP6AP1LQ52LC2 224 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 DCAF6Q58WW2 860 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 CAVIN3Q969G5 261 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ZNF560Q96MR9 790 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 GRIP2Q9C0E4 1043 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 RIBC2Q9H4K1 309 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 DDX20Q9UHI6 824 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 GPC1P35052 558 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PTGER2P43116 358 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 RNF149Q8NC42 400 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 TMEM143Q96AN5 459 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 NEO1Q92859 1461 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PTPN4P29074 926 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 KRT20P35900 424 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ERVK-24P63145 666 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 SCFD2Q8WU76 684 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 SEMA4DQ92854 862 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 NRDE2Q9H7Z3 1164 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 METP08581 1390 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 SEMA3DO95025 777 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PRLRP16471 622 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 GTF2H1P32780 548 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 CRKP46108 304 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 ABATP80404 500 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 VEPH1Q14D04 833 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PDK1Q15118 436 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 B3GALNT2Q8NCR0 500 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PPP2R3CQ969Q6 453 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 SLC10A4Q96EP9 437 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 REEP2Q9BRK0 252 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 CATSPERBQ9H7T0 1116 aa11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
GTF3C1-201ENST00000356183 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 O00370 1275 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RAD51BO15315 384 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 MAP3K6O95382 1288 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 DSG3P32926 999 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 TSNQ15631 228 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 UGT3A1Q6NUS8 523 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 PGBD2Q6P3X8 592 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ATG4AQ8WYN0 398 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 NMRK2Q9NPI5 230 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 LOC102724428A0A0B4J2F2 783 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 GUCY1B2O75343 617 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ATP6V1C1P21283 382 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ITGA3P26006 1051 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 SIK1P57059 783 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RBBP4Q09028 425 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 DENND1BQ6P3S1 775 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 SGMS1Q86VZ5 419 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 EID3Q8N140 333 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 SVOPQ8N4V2 548 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 TTC39CQ8N584 583 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 TUBGCP4Q9UGJ1 667 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 AKR1D1P51857 326 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ST8SIA6P61647 398 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 GRIK3Q13003 919 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 TMEM132DQ14C87 1099 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RMND5BQ96G75 393 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 SEPT5Q99719 369 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 EHD3Q9NZN3 535 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 IQCMA0A1B0GVH7 501 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 PDXKO00764 312 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 LSM1O15116 133 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RAD23AP54725 363 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 AGKQ53H12 422 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 C11orf63Q6NUN7 778 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 TPCN2Q8NHX9 752 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 GPRASP2Q96D09 838 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 MRPL48Q96GC5 212 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 PDCD10Q9BUL8 212 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RGS18Q9NS28 235 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 FKBP6O75344 327 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 TNFAIP8O95379 198 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 EYA4O95677 639 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RGS2P41220 211 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 LGALS3BPQ08380 585 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 QKIQ96PU8 341 aaKnown RBP eCLIP11.38□□□□□ -0.592e-11■■■■■ 32.4
GTF3C1-201ENST00000356183 TSEN34Q9BSV6 310 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 ALG6Q9Y672 507 aa11.38□□□□□ -0.59
GTF3C1-201ENST00000356183 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 BIRC5O15392 142 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 PMPCBO75439 489 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 BAIAP3O94812 1187 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 PLEKP08567 350 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 TTLL4Q14679 1199 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ZC2HC1CQ53FD0 456 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms