RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 O00370 1275 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 ITGB3P05106 788 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 HSMCR30P0CW71 290 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 PPP1R10Q96QC0 940 aaKnown RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 OLFM1Q99784 485 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 UGGT1Q9NYU2 1555 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 RAD54BQ9Y620 910 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 MUTP22033 750 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 MAGEA10P43363 369 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 TRAF2Q12933 501 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF438Q7Z4V0 828 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 HNRNPLLQ8WVV9 542 aaKnown RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 ISCA1Q9BUE6 129 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 TMEM120AQ9BXJ8 343 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FHDC1Q9C0D6 1143 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 WHRNQ9P202 907 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 GTF3C4Q9UKN8 822 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 DNAJC16Q9Y2G8 782 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 MGAT4DA6NG13 374 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 SLCO1B7G3V0H7 640 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 NDUFB10O96000 172 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CYP19A1P11511 503 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CCT8P50990 548 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 NEK10Q6ZWH5 1172 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 LRRC6Q86X45 466 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 DPP3Q9NY33 737 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 NEO1Q92859 1461 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 LRG1P02750 347 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 PCNAP12004 261 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CNTFP26441 200 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 OTUD4Q01804 1114 aaKnown RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 PDPK2PQ6A1A2 396 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 TAF2Q6P1X5 1199 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 GPRC5DQ9NZD1 345 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CHORDC1Q9UHD1 332 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 SLC25A13Q9UJS0 675 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 F5H5T6 163 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CYP27B1O15528 508 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 FAM20BO75063 409 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 SCTRP47872 440 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 ITGA9Q13797 1035 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 PDK2Q15119 407 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 TDRD5Q8NAT2 981 aaKnown RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 VMP1Q96GC9 406 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 PIPSLA2A3N6 862 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 ASS1P00966 412 aaKnown RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 CYP2C9P11712 490 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 AQP5P55064 265 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 INAQ16352 499 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-201ENST00000355497 RNFT2Q96EX2 444 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 RIT2Q99578 217 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 ARHGEF40Q8TER5 1519 aa15.36■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF862O60290 1169 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 HBP1O60381 514 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CLPTM1O96005 669 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 VCLP18206 1134 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 WDR36Q8NI36 951 aaKnown RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CHST12Q9NRB3 414 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 DDIT4Q9NX09 232 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 ERAP1Q9NZ08 941 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 PADI4Q9UM07 663 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 HPGDP15428 266 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 FLT3P36888 993 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CRYMQ14894 314 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 TMC5Q6UXY8 1006 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 PARK7Q99497 189 aaKnown RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CLEC4MQ9H2X3 399 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 VCPKMTQ9H867 229 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 LRRC40Q9H9A6 602 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 TMBIM4Q9HC24 238 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 COMMD8Q9NX08 183 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 GLRBP48167 497 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 ATG16L2Q8NAA4 619 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 IGDCC4Q8TDY8 1250 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 TMEM106CQ9BVX2 250 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 ABI2Q9NYB9 513 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 SPATA2Q9UM82 520 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 DRG1Q9Y295 367 aaKnown RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 DAGLAQ9Y4D2 1042 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 YWHAZP63104 245 aaKnown RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CNGA2Q16280 664 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 TYW3Q6IPR3 259 aaKnown RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 GTF3C2Q8WUA4 911 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 LRRC39Q96DD0 335 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 RPRD1AQ96P16 312 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 ANKEF1Q9NU02 776 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CENPXA8MT69 81 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 DNALI1O14645 258 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-201ENST00000355497 RBP1P09455 135 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 ARMC4Q5T2S8 1044 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 TRIQKQ629K1 86 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 CYP4F12Q9HCS2 524 aa15.35■□□□□ 0.05
LMX1B-201ENST00000355497 TBX20Q9UMR3 447 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms