RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RPL21P46778 160 aaKnown RBP13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PDK2Q15119 407 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 TAB1Q15750 504 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRPC4APQ8TEL6 797 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 USP33Q8TEY7 942 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 TAF6LQ9Y6J9 622 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 CENPXA8MT69 81 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 UBDO15205 165 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 CCDC153Q494R4 210 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM45BPQ6NSW5 357 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 USP13Q92995 863 aaPredicted RBP13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 CROTQ9UKG9 612 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 IPPQ9Y573 584 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 NR5A2O00482 541 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 SNPHO15079 494 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 LDLRP01130 860 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PGK2P07205 417 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRKAA1Q13131 559 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZNF554Q86TJ5 538 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 KLHL23Q8NBE8 558 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 SGF29Q96ES7 293 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 LATS2Q9NRM7 1088 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PROSCO94903 275 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 IL18RAPO95256 599 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 SGPL1O95470 568 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 RRM2P31350 389 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 SKIV2L2P42285 1042 aaKnown RBP13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PSMC6P62333 389 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 KLHL12Q53G59 568 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 IPMKQ8NFU5 416 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM25AB3EWG3 89 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM25CB3EWG5 89 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM25GB3EWG6 89 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 ITGA4P13612 1032 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 ALOX12P18054 663 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 AGKQ53H12 422 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 NINJ2Q9NZG7 142 aa13.13□□□□□ -0.31
SYNCRIP-201ENST00000355238 FLT1P17948 1338 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRIM13O60858 407 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 FAM20BO75063 409 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 RBP1P09455 135 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 PIK3R1P27986 724 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 LTKP29376 864 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 PDK3Q15120 406 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 NT5C1AQ9BXI3 368 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 SPRTNQ9H040 489 aaPredicted RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 KRT84Q9NSB2 600 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 MBD2Q9UBB5 411 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 SPATA2Q9UM82 520 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 SNAP23O00161 211 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 ZC3H11AO75152 810 aaKnown RBP eCLIP13.12□□□□□ -0.311e-10■□□□□ 9.2
SYNCRIP-201ENST00000355238 MPOP05164 745 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 CNGA2Q16280 664 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 MEA1Q16626 185 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 ATP6AP1LQ52LC2 224 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 SNRNP48Q6IEG0 339 aaKnown RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 CAPSLQ8WWF8 208 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 TJP2Q9UDY2 1190 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 NUP62P37198 522 aaPredicted RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 DDR2Q16832 855 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 JPH1Q9HDC5 661 aaPredicted RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 MEI4A8MW99 385 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 VWA5AO00534 786 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 GRB10Q13322 594 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 SPOCD1Q6ZMY3 1216 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 FGD2Q7Z6J4 655 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 KRT73Q86Y46 540 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 BTN2A2Q8WVV5 523 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 EURLQ9NYK6 297 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 CYP2C8P10632 490 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 CYP11B1P15538 503 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 CYP51A1Q16850 503 aa13.12□□□□□ -0.31
SYNCRIP-201ENST00000355238 UGT3A1Q6NUS8 523 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms