RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ADCY2Q08462 1091 aa18.02■□□□□ 0.48
VPS13B-201ENST00000355155 MAPRE1Q15691 268 aaKnown RBP18.02■□□□□ 0.48
VPS13B-201ENST00000355155 METTL23Q86XA0 190 aa18.02■□□□□ 0.48
VPS13B-201ENST00000355155 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.48
VPS13B-201ENST00000355155 URGCPQ8TCY9 931 aa18.02■□□□□ 0.48
VPS13B-201ENST00000355155 PGAP3Q96FM1 320 aaPredicted RBP18.02■□□□□ 0.48
VPS13B-201ENST00000355155 CNGB3Q9NQW8 809 aa18.02■□□□□ 0.48
VPS13B-201ENST00000355155 CASTOR2A6NHX0 329 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 H0YGN5 161 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 CAPN2P17655 700 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 YY1P25490 414 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 MATKP42679 507 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 VCPP55072 806 aaKnown RBP18.02■□□□□ 0.47
VPS13B-201ENST00000355155 HDAC4P56524 1084 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 MDH1BQ5I0G3 518 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 SCUBE3Q8IX30 993 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 ALLCQ8N6M5 410 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 ZMIZ2Q8NF64 920 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 FMO2Q99518 471 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 SMOQ99835 787 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 TMEM51Q9NW97 253 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 NFS1Q9Y697 457 aa18.02■□□□□ 0.47
VPS13B-201ENST00000355155 SPDYE4A6NLX3 237 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 KRT17Q04695 432 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 GABPB1Q06547 395 aaPredicted RBP18.01■□□□□ 0.47
VPS13B-201ENST00000355155 SMARCD1Q96GM5 515 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 PCED1BQ96HM7 432 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 ZNF670Q9BS34 389 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 TSPYL1Q9H0U9 437 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.01■□□□□ 0.473e-7■■□□□ 14.1
VPS13B-201ENST00000355155 RCOR3Q9P2K3 495 aaPredicted RBP18.01■□□□□ 0.47
VPS13B-201ENST00000355155 ENPP3O14638 875 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 OAZ2O95190 189 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
VPS13B-201ENST00000355155 AIF1P55008 147 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 UAP1Q16222 522 aaPredicted RBP18.01■□□□□ 0.47
VPS13B-201ENST00000355155 DPYSL2Q16555 572 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 SLC25A52Q3SY17 297 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 PM20D1Q6GTS8 502 aa18.01■□□□□ 0.47
VPS13B-201ENST00000355155 LRRD1A4D1F6 860 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 GOLGA6BA6NDN3 693 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 APOC4-APOC2K7ER74 178 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 POMCP01189 267 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 APOC2P02655 101 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 OAS2P29728 719 aaKnown RBP18■□□□□ 0.47
VPS13B-201ENST00000355155 DPYSL3Q14195 570 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 SLC9A4Q6AI14 798 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 BHLHA9Q7RTU4 235 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 CCDC89Q8N998 374 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 SH3TC2Q8TF17 1288 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 SNF8Q96H20 258 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 NPY6RQ99463 290 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 FNDC1Q4ZHG4 1894 aaPredicted RBP18■□□□□ 0.47
VPS13B-201ENST00000355155 NOS2P35228 1153 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 SSR1P43307 286 aaKnown RBP18■□□□□ 0.47
VPS13B-201ENST00000355155 KCNJ1P48048 391 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 OTUD1Q5VV17 481 aaPredicted RBP18■□□□□ 0.47
VPS13B-201ENST00000355155 FAM172AQ8WUF8 416 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 SLC9A7Q96T83 725 aa18■□□□□ 0.47
VPS13B-201ENST00000355155 MYBPHLA2RUH7 354 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 PI4K2BG5E9Z4 385 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 SYN3O14994 580 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 PRPSAP2O60256 369 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 BEST1O76090 585 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 DDHD2O94830 711 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 CCL5P13501 91 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 IL4RP24394 825 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 BYSLQ13895 437 aaKnown RBP17.99■□□□□ 0.47
VPS13B-201ENST00000355155 HLTFQ14527 1009 aaKnown RBP eCLIP17.99■□□□□ 0.474e-7■■■■□ 26.3
VPS13B-201ENST00000355155 TAF5Q15542 800 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 CCDC142Q17RM4 750 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 C15orf59Q2T9L4 293 aaPredicted RBP17.99■□□□□ 0.47
VPS13B-201ENST00000355155 EMC10Q5UCC4 262 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 SEPT8Q92599 483 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 CFAP57Q96MR6 1250 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 TMEM175Q9BSA9 504 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 HEMGNQ9BXL5 484 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 SNX24Q9Y343 169 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 USP3Q9Y6I4 520 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 HOXA2O43364 376 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 OPA1O60313 960 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 B3GAT3O94766 335 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 NUDT17P0C025 328 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 KRT10P13645 584 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 TGM2P21980 687 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 DAOAP59103 153 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 TFDP2Q14188 446 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 MRPL58Q14197 206 aaKnown RBP17.99■□□□□ 0.47
VPS13B-201ENST00000355155 MAP7D3Q8IWC1 876 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 ATG4AQ8WYN0 398 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 ZIM3Q96PE6 472 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 DPH5Q9H2P9 285 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 TBC1D13Q9NVG8 400 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 CACNG4Q9UBN1 327 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 GOLGA8KD6RF30 607 aa17.99■□□□□ 0.47
VPS13B-201ENST00000355155 ACAT1P24752 427 aaKnown RBP17.99■□□□□ 0.47
VPS13B-201ENST00000355155 HSD17B3P37058 310 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms