RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TMEM130Q8N3G9 435 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 SERPINB12Q96P63 405 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 SGIP1Q9BQI5 828 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 ROPN1BQ9BZX4 212 aaPredicted RBP9.77□□□□□ -0.84
SMG6-202ENST00000354901 KLHL4Q9C0H6 718 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 ARMC7Q9H6L4 198 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 ROPN1Q9HAT0 212 aaPredicted RBP9.77□□□□□ -0.84
SMG6-202ENST00000354901 PGAP2Q9UHJ9 254 aa9.77□□□□□ -0.84
SMG6-202ENST00000354901 EXOC1LA0A1B0GW35 172 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 PMM2O15305 246 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 CCDC22O60826 627 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 C4BPAP04003 597 aaKnown RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 EDN1P05305 212 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 WEE2P0C1S8 567 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 GARTP22102 1010 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 GTF2H1P32780 548 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 ARSEP51690 589 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 EPHB1P54762 984 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 OXCT1P55809 520 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 WDR4P57081 412 aaKnown RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 CNTN2Q02246 1040 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 CDC16Q13042 620 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 ORC1Q13415 861 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 ANKMY2Q8IV38 441 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 CCDC89Q8N998 374 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 RNF169Q8NCN4 708 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 RFWD2Q8NHY2 731 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 TEPSINQ96N21 525 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 NTPCRQ9BSD7 190 aaKnown RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 PDLIM1O00151 329 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 FOXD2O60548 495 aaPredicted RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 STBD1O95210 358 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 SERPINB6P35237 376 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 MAGEA4P43358 317 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 RXRGP48443 463 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 ARFIP2P53365 341 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 CENPCQ03188 943 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 NCOA4Q13772 614 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 C16orf72Q14CZ0 275 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 MFSD5Q6N075 450 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 DPH6Q7L8W6 267 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 ABRAQ8N0Z2 381 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 EFCAB3Q8N7B9 438 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 MAML1Q92585 1016 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 AZIN2Q96A70 460 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 ZMAT2Q96NC0 199 aaKnown RBP9.77□□□□□ -0.85
SMG6-202ENST00000354901 TMEM109Q9BVC6 243 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 PCDH18Q9HCL0 1135 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 WDR37Q9Y2I8 494 aa9.77□□□□□ -0.85
SMG6-202ENST00000354901 TMEM221A6NGB7 291 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 MEI4A8MW99 385 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 B2RBV5 119 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 GSC2O15499 205 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 ZBTB7AO95365 584 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SRGAP2CP0DJJ0 459 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 GLRA2P23416 452 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SLC1A1P43005 524 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TMED10P49755 219 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 ITGA7Q13683 1181 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 BTG3Q14201 252 aaPredicted RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 KCNT1Q5JUK3 1230 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 PPP1R21Q6ZMI0 780 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 UTS2BQ765I0 119 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 ENOSF1Q7L5Y1 443 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SLC26A7Q8TE54 656 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 GPRASP2Q96D09 838 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 CCDC77Q9BR77 488 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TMEM121Q9BTD3 319 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 CENPOQ9BU64 300 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SHCBP1LQ9BZQ2 653 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 IMPG2Q9BZV3 1241 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 AVENQ9NQS1 362 aaPredicted RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 ANLNQ9NQW6 1124 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SELENONQ9NZV5 590 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 PPM1HQ9ULR3 514 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 KAT6AQ92794 2004 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 FAM47DPA6NHR8 397 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SGK1O00141 431 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TROVE2P10155 538 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMG6-202ENST00000354901 ANPEPP15144 967 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 CD19P15391 556 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 ACO1P21399 889 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 TBL3Q12788 808 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 DCTN2Q13561 401 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 TMEM132BQ14DG7 1078 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 CLNKQ7Z7G1 428 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 ZBED8Q8IZ13 594 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 ZNF606Q8WXB4 792 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SLC7A3Q8WY07 619 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 USP6NLQ92738 828 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 SPATA17Q96L03 361 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 BTBD10Q9BSF8 475 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 MRPL47Q9HD33 250 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 NXF1Q9UBU9 619 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 HACL1Q9UJ83 578 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 NEU2Q9Y3R4 380 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms