RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 GLI1P08151 1106 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 SDC4P31431 198 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 DAOAP59103 153 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 TAS2R40P59535 323 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 KRT17Q04695 432 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 RASIP1Q5U651 963 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 RNF19BQ6ZMZ0 732 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 C2orf15Q8WU43 125 aaKnown RBP16.35■□□□□ 0.21
CTSA-202ENST00000354880 NDRG1Q92597 394 aaKnown RBP16.35■□□□□ 0.21
CTSA-202ENST00000354880 CFAP57Q96MR6 1250 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 EHD2Q9NZN4 543 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 PDE2AO00408 941 aaPredicted RBP16.35■□□□□ 0.21
CTSA-202ENST00000354880 DPYSL4O14531 572 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 LRCH4O75427 683 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 FGF18O76093 207 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 URODP06132 367 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 DESP17661 470 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 RPL17P18621 184 aaKnown RBP16.35■□□□□ 0.21
CTSA-202ENST00000354880 OR1D2P34982 312 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 YWHAZP63104 245 aaKnown RBP16.35■□□□□ 0.21
CTSA-202ENST00000354880 ROR1Q01973 937 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 CCDC14Q49A88 953 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 SCML4Q8N228 414 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 RASGEF1CQ8N431 466 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 LRRN4CLQ8ND94 238 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 ACTRT1Q8TDG2 376 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 C8orf48Q96LL4 319 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 USP3Q9Y6I4 520 aa16.35■□□□□ 0.21
CTSA-202ENST00000354880 WDR27A2RRH5 827 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 TNFRSF10BO14763 440 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 ADAM12O43184 909 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 TCF4P15884 667 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 SLC5A3P53794 718 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 TERF1P54274 439 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 C15orf59Q2T9L4 293 aaPredicted RBP16.34■□□□□ 0.21
CTSA-202ENST00000354880 LRRC38Q5VT99 294 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 PM20D1Q6GTS8 502 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 ARFGAP1Q8N6T3 406 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
CTSA-202ENST00000354880 CLSTN3Q9BQT9 956 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 DDX23Q9BUQ8 820 aaKnown RBP16.34■□□□□ 0.21
CTSA-202ENST00000354880 PLVAPQ9BX97 442 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■□□□ 12.2
CTSA-202ENST00000354880 SMARCAL1Q9NZC9 954 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 CEP290O15078 2479 aa16.34■□□□□ 0.21
CTSA-202ENST00000354880 LCHNA4D1U4 455 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 YJEFN3A6XGL0 299 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 E7ENQ6 273 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 PGRMC1O00264 195 aaKnown RBP16.33■□□□□ 0.21
CTSA-202ENST00000354880 DAB1O75553 588 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 VNN2O95498 520 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 PCK1P35558 622 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 MATKP42679 507 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 PTPN9P43378 593 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 ATP11AP98196 1134 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 ZNF211Q13398 564 aaPredicted RBP16.33■□□□□ 0.21
CTSA-202ENST00000354880 DDR2Q16832 855 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 HADHQ16836 314 aaKnown RBP16.33■□□□□ 0.21
CTSA-202ENST00000354880 CDO1Q16878 200 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.21
CTSA-202ENST00000354880 TTC9BQ8N6N2 239 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 SCAMP5Q8TAC9 235 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 IRGQQ8WZA9 623 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 RPGRIP1Q96KN7 1286 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 POPDC2Q9HBU9 364 aa16.33■□□□□ 0.21
CTSA-202ENST00000354880 TTC7AQ9ULT0 858 aaPredicted RBP16.33■□□□□ 0.21
CTSA-202ENST00000354880 TADA3O75528 432 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 PYGMP11217 842 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 GJC1P36383 396 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 SLC25A11Q02978 314 aaKnown RBP16.33■□□□□ 0.2
CTSA-202ENST00000354880 DUSP4Q13115 394 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 MGAT5BQ3V5L5 792 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 SH3PXD2AQ5TCZ1 1133 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 SEL1L2Q5TEA6 688 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 HFE2Q6ZVN8 426 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 POLNQ7Z5Q5 900 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 GPR65Q8IYL9 337 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 KATNAL2Q8IYT4 538 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 DEFB106AQ8N104 65 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 FAM172AQ8WUF8 416 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 SLC2A13Q96QE2 648 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 CRISPLD1Q9H336 500 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 MRPL17Q9NRX2 175 aaKnown RBP16.33■□□□□ 0.2
CTSA-202ENST00000354880 CHD7Q9P2D1 2997 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 SLC27A5Q9Y2P5 690 aa16.33■□□□□ 0.2
CTSA-202ENST00000354880 EFCAB8A8MWE9 144 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 LTFP02788 710 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 KRT7P08729 469 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 HAPLN1P10915 354 aaPredicted RBP16.32■□□□□ 0.2
CTSA-202ENST00000354880 MIPP30301 263 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 NOS2P35228 1153 aa16.32■□□□□ 0.2
CTSA-202ENST00000354880 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.26e-6■■■■□ 21.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms