RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 ELF1P32519 619 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 RFC1P35251 1148 aaPredicted RBP21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 IRS1P35568 1242 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 PDE12Q6L8Q7 609 aaKnown RBP21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 SYT10Q6XYQ8 523 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 DAAM2Q86T65 1068 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 LRRC57Q8N9N7 239 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 JOSD2Q8TAC2 188 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 SCAMP5Q8TAC9 235 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 ARNTL2Q8WYA1 636 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 NDRG1Q92597 394 aaKnown RBP21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 KHSRPQ92945 711 aaKnown RBP eCLIP21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 SPATA17Q96L03 361 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 WDR24Q96S15 920 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 TMEM59LQ9UK28 342 aa21.13■□□□□ 0.97
SIGMAR1-202ENST00000353468 ZBED1O96006 694 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 USP17L7P0C7H9 530 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 KLRC2P26717 231 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 DAOAP59103 153 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 RNASE9P60153 205 aaKnown RBP21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 SMAD3P84022 425 aaKnown RBP21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 MESDQ14696 234 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 TAF5Q15542 800 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 EFHC1Q5JVL4 640 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 PM20D1Q6GTS8 502 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 SLC26A9Q7LBE3 791 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 SYCE1Q8N0S2 351 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 SCML4Q8N228 414 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 DNAI1Q9UI46 699 aa21.12■□□□□ 0.97
SIGMAR1-202ENST00000353468 TMEM110-MUSTN1A8MSY1 372 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 TGM5O43548 720 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 GRAP2O75791 330 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 DENND5BQ6ZUT9 1274 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 SLFN11Q7Z7L1 901 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 TCEAL8Q8IYN2 117 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 EMC1Q8N766 993 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 GPR152Q8TDT2 470 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 TIFAQ96CG3 184 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 GOLPH3Q9H4A6 298 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 IP6K2Q9UHH9 426 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 PATJQ8NI35 1801 aa21.11■□□□□ 0.97
SIGMAR1-202ENST00000353468 PRRG1O14668 218 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 SART1O43290 800 aaKnown RBP21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 ATF6P18850 670 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 MLLT1Q03111 559 aaPredicted RBP21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 IFRD2Q12894 506 aaPredicted RBP21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 C11orf63Q6NUN7 778 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 LILRA6Q6PI73 481 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 ARCQ7LC44 396 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 STKLD1Q8NE28 680 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 FNIP1Q8TF40 1166 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 IRGQQ8WZA9 623 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 FAM149B1Q96BN6 582 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 CEP295NLQ96MC4 621 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 FBXO44Q9H4M3 255 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 ASNSD1Q9NWL6 643 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 RANBP2P49792 3224 aaKnown RBP21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 TNRC18O15417 2968 aaPredicted RBP21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 GLI1P08151 1106 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 ALDH1A3P47895 512 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 OGDHQ02218 1023 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 GIPC2Q8TF65 315 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 LMAN2LQ9H0V9 348 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 COMMD8Q9NX08 183 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 IL37Q9NZH6 218 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 LCMT1Q9UIC8 334 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 YIPF1Q9Y548 306 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 ALG6Q9Y672 507 aa21.1■□□□□ 0.97
SIGMAR1-202ENST00000353468 PDE4DIPQ5VU43 2346 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 C2CD4BA6NLJ0 364 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 YJEFN3A6XGL0 299 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 E7ENQ6 273 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 HSF2BPO75031 334 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 PROSCO94903 275 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 RTN3O95197 1032 aaPredicted RBP21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 FTCDO95954 541 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 SPATA31D3P0C874 917 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 CASQ1P31415 396 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 FLT3P36888 993 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 SPATA31D4Q6ZUB0 917 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 BHLHA9Q7RTU4 235 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 RXFP2Q8WXD0 754 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 FBXW11Q9UKB1 542 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 JRKLQ9Y4A0 524 aa21.09■□□□□ 0.97
SIGMAR1-202ENST00000353468 SLC38A8A6NNN8 435 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 FANCGO15287 622 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 GLUD1P00367 558 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 PDGFRAP16234 1089 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 GPD1P21695 349 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 PSMA2P25787 234 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 USP46P62068 366 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 YWHAZP63104 245 aaKnown RBP21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 ZNF252P-AS1Q0IIN9 211 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 MTMR3Q13615 1198 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 PIGHQ14442 188 aaPredicted RBP21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 DNTTIP2Q5QJE6 756 aaKnown RBP21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 TRNP1Q6NT89 227 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 HFE2Q6ZVN8 426 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 PEX26Q7Z412 305 aa21.08■□□□□ 0.97
SIGMAR1-202ENST00000353468 GDPD5Q8WTR4 605 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms