RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ZBTB22O15209 634 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 TARSP26639 723 aaKnown RBP10.32□□□□□ -0.76
COL11A1-201ENST00000353414 CCNG1P51959 295 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 PRAMEF19Q5SWL8 479 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 FAM171A1Q5VUB5 890 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 PARGQ86W56 976 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ZNF786Q8N393 782 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 MDM1Q8TC05 714 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ATG4AQ8WYN0 398 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 LNPEPQ9UIQ6 1025 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 FAM25AB3EWG3 89 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 FAM25CB3EWG5 89 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 FAM25GB3EWG6 89 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 SGPL1O95470 568 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 SPATA31D3P0C874 917 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 TMED10P49755 219 aaKnown RBP10.32□□□□□ -0.76
COL11A1-201ENST00000353414 DYNC1I2Q13409 638 aaKnown RBP10.32□□□□□ -0.76
COL11A1-201ENST00000353414 PDK1Q15118 436 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 PRR5LQ6MZQ0 368 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 SPATA31D4Q6ZUB0 917 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 NECAB2Q7Z6G3 386 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ADI1Q9BV57 179 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 MAPK10P53779 464 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 CCDC144BQ3MJ40 725 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 EMBQ6PCB8 327 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 SPATA21Q7Z572 469 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 IZUMO1Q8IYV9 350 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 DPF2Q92785 391 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 WWP1Q9H0M0 922 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 SIK3Q9Y2K2 1263 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 PTCH1Q13635 1447 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 PIPSLA2A3N6 862 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 DGAT1O75907 488 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ALDH2P05091 517 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 GHRP10912 638 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 KLRK1P26718 216 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ADSLP30566 484 aaPredicted RBP10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ENOSF1Q7L5Y1 443 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 MICU2Q8IYU8 434 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 LPCAT1Q8NF37 534 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 ZNF304Q9HCX3 659 aa10.32□□□□□ -0.76
COL11A1-201ENST00000353414 WDR19Q8NEZ3 1342 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 USP1O94782 785 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 DDNO94850 711 aaPredicted RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 IL18RAPO95256 599 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 SFSWAPQ12872 951 aaKnown RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 BTG3Q14201 252 aaPredicted RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 STRIP1Q5VSL9 837 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 HLA-DQA1Q5Y7H0 255 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 CES3Q6UWW8 571 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 C16orf89Q6UX73 402 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 RIN2Q8WYP3 895 aaPredicted RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 OMDQ99983 421 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 ZDHHC6Q9H6R6 413 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 ELL3Q9HB65 397 aaPredicted RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 TUBE1Q9UJT0 475 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 EIF3LQ9Y262 564 aaKnown RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PFASO15067 1338 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 EXTL3O43909 919 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PRKAG1P54619 331 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 TRAF2Q12933 501 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 POU6F1Q14863 301 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 UGT3A1Q6NUS8 523 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 CYP20A1Q6UW02 462 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 EPHX4Q8IUS5 362 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 GALNT8Q9NY28 637 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 CYP39A1Q9NYL5 469 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 STOML1Q9UBI4 398 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 LRRIQ3A6PVS8 624 aaPredicted RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PEX1O43933 1283 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PHF2O75151 1096 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 RRM2P31350 389 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 ZNF543Q08ER8 600 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 EPS8Q12929 822 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 CUL4AQ13619 759 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 NBPF9Q3BBW0 867 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PLEKHH3Q7Z736 793 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 SAPCD2Q86UD0 394 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 ANKRD13AQ8IZ07 590 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PCYOX1LQ8NBM8 494 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 UTP15Q8TED0 518 aaKnown RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PRPF18Q99633 342 aaKnown RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 OLFM1Q99784 485 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 MXRA8Q9BRK3 442 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 KRCC1Q9NPI7 259 aaPredicted RBP10.31□□□□□ -0.76
COL11A1-201ENST00000353414 GPRC5DQ9NZD1 345 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 MAGI2Q86UL8 1455 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 HBP1O60381 514 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 BEX3Q00994 111 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 PTK6Q13882 451 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 ZSWIM7Q19AV6 140 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 VPS37AQ8NEZ2 397 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 CLPBQ9H078 707 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 CARD9Q9H257 536 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 LRRC14BA6NHZ5 514 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 C19orf81C9J6K1 198 aa10.31□□□□□ -0.76
COL11A1-201ENST00000353414 M0R3G1 203 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms