RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PASD1Q8IV76 773 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CCDC89Q8N998 374 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 RBBP8NLQ8NC74 664 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 MAML1Q92585 1016 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 RBM15Q96T37 977 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PAIP2Q9BPZ3 127 aaKnown RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PADI3Q9ULW8 664 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ACTL7BQ9Y614 415 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 FAM47DPA6NHR8 397 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SPTLC1O15269 473 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SPAG7O75391 227 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ASMTLO95671 621 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SKIV2L2P42285 1042 aaKnown RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 AP3M2P53677 418 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 TAS2R40P59535 323 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CENPCQ03188 943 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CCDC15Q0P6D6 951 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 DNAJC3Q13217 504 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 TRPC3Q13507 836 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 STAT4Q14765 748 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 GPNMBQ14956 572 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SURF1Q15526 300 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CCNG2Q16589 344 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 DCAF4L1Q3SXM0 396 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 FBXO47Q5MNV8 452 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PPP1R21Q6ZMI0 780 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 BZW1Q7L1Q6 419 aaKnown RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 RTN4RL1Q86UN2 441 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 GLIS1Q8NBF1 620 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SLC43A3Q8NBI5 491 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 GRAMD1AQ96CP6 724 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 FAM81BQ96LP2 452 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 LPIN3Q9BQK8 851 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 NIF3L1Q9GZT8 377 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 KIF9Q9HAQ2 790 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 AVENQ9NQS1 362 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 WBP1LQ9NX94 342 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SKAP2O75563 359 aaPredicted RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 PROSCO94903 275 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ATF7P17544 494 aaPredicted RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 KLRC2P26717 231 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 MAGEA4P43358 317 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 MNX1P50219 401 aaPredicted RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 IL9RQ01113 521 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 P3H1Q32P28 736 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 XKR4Q5GH76 650 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 TWF2Q6IBS0 349 aaKnown RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 WDTC1Q8N5D0 677 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 CCDC77Q9BR77 488 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 BCO2Q9BYV7 579 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 OSBPL8Q9BZF1 889 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 TRIM6Q9C030 488 aaPredicted RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 MYLK2Q9H1R3 596 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 SLCO1B3Q9NPD5 702 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 CNTN3Q9P232 1028 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 GRID1Q9ULK0 1009 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 C2CD2Q9Y426 696 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 PCDHB2Q9Y5E7 798 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 CKBP12277 381 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ATP2A2P16615 1042 aaKnown RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 AXLP30530 894 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ATP11AP98196 1134 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 PTP4A2Q12974 167 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ANKRD20A2Q5SQ80 823 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ANKRD20A1Q5TYW2 823 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ANKRD20A3Q5VUR7 823 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 MON1BQ7L1V2 547 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ENOSF1Q7L5Y1 443 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 TRABD2AQ86V40 505 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 DNAJC5GQ8N7S2 189 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF606Q8WXB4 792 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ERP27Q96DN0 273 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 HPDLQ96IR7 371 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 GLT1D1Q96MS3 346 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 DEFB118Q96PH6 123 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 TMEM237Q96Q45 408 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 ELOVL4Q9GZR5 314 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 PAK6Q9NQU5 681 aaPredicted RBP9□□□□□ -0.97
TRIM55-204ENST00000353317 CHKBQ9Y259 395 aa9□□□□□ -0.97
TRIM55-204ENST00000353317 TDRD15B5MCY1 1934 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 EXOC1LA0A1B0GW35 172 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 CYP1A1P04798 512 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 TARSP26639 723 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 GNA15P30679 374 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 GJC1P36383 396 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 NSFP46459 744 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 YARSP54577 528 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 RAD23BP54727 409 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 PTK7Q13308 1070 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 FASTKD3Q14CZ7 662 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 TCTN1Q2MV58 587 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 HP1BP3Q5SSJ5 553 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 AGMOQ6ZNB7 445 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 GSTA5Q7RTV2 222 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 RHOT1Q8IXI2 618 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 ZCCHC9Q8N567 271 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms