RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 VDRP11473 427 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 NDST1P52848 882 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 MTFR1Q15390 333 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 TAF2Q6P1X5 1199 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 ARHGEF18Q6ZSZ5 1173 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 RHOT1Q8IXI2 618 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 TTC39CQ8N584 583 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 MCEEQ96PE7 176 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 PLVAPQ9BX97 442 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.49■□□□□ 0.71
SPNS1-204ENST00000352260 USTQ9Y2C2 406 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 TRIP11Q15643 1979 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 TMEM120BA0PK00 339 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 FSCN2O14926 492 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 RPL21P46778 160 aaKnown RBP19.49■□□□□ 0.71
SPNS1-204ENST00000352260 ZNF252P-AS1Q0IIN9 211 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 ANO7Q6IWH7 933 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 ARHGEF2Q92974 986 aaKnown RBP19.49■□□□□ 0.71
SPNS1-204ENST00000352260 C18orf8Q96DM3 657 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 HEXIM2Q96MH2 286 aaKnown RBP19.49■□□□□ 0.71
SPNS1-204ENST00000352260 VCXQ9H320 206 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 RNF19AQ9NV58 838 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 TJP2Q9UDY2 1190 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 GTF2IRD1Q9UHL9 959 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 STRIP2Q9ULQ0 834 aa19.49■□□□□ 0.71
SPNS1-204ENST00000352260 A8MUI8 341 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 SEPT4O43236 478 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 RASSF2P50749 326 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 CAP1Q01518 475 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 OGDHQ02218 1023 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 TAP1Q03518 808 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 SETDB1Q15047 1291 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 TTC27Q6P3X3 843 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 DCUN1D2Q6PH85 259 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 VSTM1Q6UX27 236 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 PPP1R21Q6ZMI0 780 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 KIF2BQ8N4N8 673 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 LRRC52Q8N7C0 313 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 RNF39Q9H2S5 420 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 SPC25Q9HBM1 224 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 KLK14Q9P0G3 267 aa19.48■□□□□ 0.71
SPNS1-204ENST00000352260 UBQLN1Q9UMX0 589 aaKnown RBP19.48■□□□□ 0.71
SPNS1-204ENST00000352260 HNRNPCL1O60812 293 aaKnown RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SMIM24O75264 130 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 RARBP10826 455 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 NKX3-2P78367 333 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 MRPS6P82932 125 aaKnown RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 MXRA7P84157 204 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 KLC1Q07866 573 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 CACNB2Q08289 660 aaPredicted RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SGO2Q562F6 1265 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 XKR4Q5GH76 650 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 C9orf57Q5W0N0 161 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 GDF6Q6KF10 455 aaPredicted RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 KATNAL2Q8IYT4 538 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 MRPL45Q9BRJ2 306 aaKnown RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 NT5C1AQ9BXI3 368 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 ETNK1Q9HBU6 452 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SCN10AQ9Y5Y9 1956 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 DPPA5A6NC42 116 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SMIM23A6NLE4 172 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 M0QYV0 167 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 GSTA2P09210 222 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 TPBGLP0DKB5 382 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 CYP3A5P20815 502 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 ALDH3A1P30838 453 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 LLGL1Q15334 1064 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 THEMIS2Q5TEJ8 643 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 C12orf50Q8NA57 414 aaPredicted RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SMG8Q8ND04 991 aaKnown RBP19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SLCO2A1Q92959 643 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 TRAPPC9Q96Q05 1148 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 CPXM1Q96SM3 734 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 HERPUD2Q9BSE4 406 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 IPPQ9Y573 584 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 TRPV2Q9Y5S1 764 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 SNX9Q9Y5X1 595 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 CDY2AQ9Y6F7 541 aa19.47■□□□□ 0.71
SPNS1-204ENST00000352260 PDCD11Q14690 1871 aaKnown RBP19.46■□□□□ 0.71
SPNS1-204ENST00000352260 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 GOLGA8SH3BPF8 625 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 PEX11AO75192 247 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 HMGCRP04035 888 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 ERBB2P04626 1255 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 KCNE1P15382 129 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 COILP38432 576 aaPredicted RBP19.46■□□□□ 0.71
SPNS1-204ENST00000352260 PSMC1P62191 440 aaKnown RBP19.46■□□□□ 0.71
SPNS1-204ENST00000352260 IRGCQ6NXR0 463 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 WHRNQ9P202 907 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 LGALS13Q9UHV8 139 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 KIAA1257Q9ULG3 409 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 SCN1AP35498 2009 aa19.46■□□□□ 0.71
SPNS1-204ENST00000352260 TRAFD1O14545 582 aaPredicted RBP19.45■□□□□ 0.7
SPNS1-204ENST00000352260 ADAMTS4O75173 837 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 PCK1P35558 622 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 GJC1P36383 396 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 GPD2P43304 727 aa19.45■□□□□ 0.7
SPNS1-204ENST00000352260 CCDC137Q6PK04 289 aaKnown RBP19.45■□□□□ 0.7
SPNS1-204ENST00000352260 DPH6Q7L8W6 267 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms