RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 SNX9Q9Y5X1 595 aa22.27■■□□□ 1.16
PTPN18-202ENST00000347849 MED7O43513 233 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 PSMC4P43686 418 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 CPT1AP50416 773 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 CCNHP51946 323 aaPredicted RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 TAF11Q15544 211 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 FSCN1Q16658 493 aaKnown RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 NAIF1Q69YI7 327 aaPredicted RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 CAPRIN2Q6IMN6 1127 aaKnown RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 MAML1Q92585 1016 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 LRRC37BQ96QE4 947 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 RBM15Q96T37 977 aaKnown RBP eCLIP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 AP5M1Q9H0R1 490 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 CHKBQ9Y259 395 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 NEU2Q9Y3R4 380 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 ACTL7BQ9Y614 415 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 KRT3P12035 628 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 GCKP35557 465 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 MAGEA4P43358 317 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 PURAQ00577 322 aaKnown RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 INCA1Q0VD86 236 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 HP1BP3Q5SSJ5 553 aaPredicted RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 ZFYVE27Q5T4F4 411 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 ALKAL1Q6UXT8 129 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 GSTA5Q7RTV2 222 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 EXD1Q8NHP7 514 aa22.26■■□□□ 1.15
PTPN18-202ENST00000347849 PIWIL1Q96J94 861 aaKnown RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 METTL5Q9NRN9 209 aaKnown RBP22.26■■□□□ 1.15
PTPN18-202ENST00000347849 SMNDC1O75940 238 aaKnown RBP eCLIP22.25■■□□□ 1.15
PTPN18-202ENST00000347849 ASMTLO95671 621 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 NFX1Q12986 1120 aaKnown RBP22.25■■□□□ 1.15
PTPN18-202ENST00000347849 CCDC89Q8N998 374 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 EURLQ9NYK6 297 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 POC1B-GALNT4F8VUJ3 575 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 IL1R2P27930 398 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 CCNG1P51959 295 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 UBXN11Q5T124 520 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 SLITRK1Q96PX8 696 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 KIF9Q9HAQ2 790 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 GOLGA2P5Q9HBQ8 144 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 STARD13Q9Y3M8 1113 aa22.25■■□□□ 1.15
PTPN18-202ENST00000347849 EXOC1LA0A1B0GW35 172 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 SIGLEC16A6NMB1 481 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 KRT1P04264 644 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 PFKMP08237 780 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 P4HA1P13674 534 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 SMTNL2Q2TAL5 461 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 P3H1Q32P28 736 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 RAB6CQ53S08 254 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 KCNT1Q5JUK3 1230 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 NAF1Q96HR8 494 aaKnown RBP22.24■■□□□ 1.15
PTPN18-202ENST00000347849 RAB6CQ9H0N0 254 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 SYNCQ9H7C4 482 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 ZFYVE28Q9HCC9 887 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 TSPAN16Q9UKR8 245 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.24■■□□□ 1.15
PTPN18-202ENST00000347849 CLGNO14967 610 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 C6orf222P0C671 652 aaPredicted RBP22.24■■□□□ 1.15
PTPN18-202ENST00000347849 VDRP11473 427 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 PSMA2P25787 234 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 ABL2P42684 1182 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 CAP1Q01518 475 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 TRIM68Q6AZZ1 485 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 ACOT1Q86TX2 421 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 ARRDC4Q8NCT1 418 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 BBOF1Q8ND07 529 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 ADAM33Q9BZ11 813 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 PLEKHA5Q9HAU0 1116 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 GABRQQ9UN88 632 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 USH1CQ9Y6N9 552 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 TRPM7Q96QT4 1865 aa22.24■■□□□ 1.15
PTPN18-202ENST00000347849 C17orf102A2RUQ5 167 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 LRCH4O75427 683 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 WFS1O76024 890 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 STAU1O95793 577 aaKnown RBP22.23■■□□□ 1.15
PTPN18-202ENST00000347849 ATF7P17544 494 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-202ENST00000347849 YARSP54577 528 aaKnown RBP22.23■■□□□ 1.15
PTPN18-202ENST00000347849 TRIM32Q13049 653 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 CCNG2Q16589 344 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 PARP6Q2NL67 630 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 ZNF449Q6P9G9 518 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 TRABD2AQ86V40 505 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 NT5DC4Q86YG4 428 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 MRRFQ96E11 262 aaKnown RBP22.23■■□□□ 1.15
PTPN18-202ENST00000347849 LRMDAQ9H2I8 198 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 SAYSD1Q9NPB0 183 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 FAM49BQ9NUQ9 324 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 ZMYND8Q9ULU4 1186 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-202ENST00000347849 ATP5HO75947 161 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 PGK1P00558 417 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 IRF5Q13568 498 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 PPP1R26Q5T8A7 1209 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-202ENST00000347849 CAPN12Q6ZSI9 719 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 C4orf33Q8N1A6 199 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 STRIP2Q9ULQ0 834 aa22.23■■□□□ 1.15
PTPN18-202ENST00000347849 PPP1R12AO14974 1030 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-202ENST00000347849 SPTLC1O15269 473 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 KRT15P19012 456 aa22.22■■□□□ 1.15
PTPN18-202ENST00000347849 IGFBP6P24592 240 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-202ENST00000347849 GCAP28676 217 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms