RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 SCAMP3O14828 347 aaKnown RBP21.28■■□□□ 1
KCNQ2-201ENST00000344425 STX6O43752 255 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 PROS1P07225 676 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 CEACAM1P13688 526 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 CSRP1P21291 193 aaKnown RBP21.28■■□□□ 1
KCNQ2-201ENST00000344425 P2RY2P41231 377 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 GAD2Q05329 585 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 ZNF252P-AS1Q0IIN9 211 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 LMAN2Q12907 356 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 BTBD8Q5XKL5 378 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 NUDT18Q6ZVK8 323 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 C7orf25Q9BPX7 421 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 TMEM30AQ9NV96 361 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 CGNQ9P2M7 1197 aaKnown RBP21.28■■□□□ 1
KCNQ2-201ENST00000344425 EVLQ9UI08 416 aaPredicted RBP21.28■■□□□ 1
KCNQ2-201ENST00000344425 PTPRDP23468 1912 aa21.28■■□□□ 1
KCNQ2-201ENST00000344425 PATE3B3GLJ2 98 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 CLDN5O00501 218 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 CDX4O14627 284 aaPredicted RBP21.27■■□□□ 1
KCNQ2-201ENST00000344425 TNFRSF10BO14763 440 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 GIPC1O14908 333 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 PHACTR2O75167 634 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
KCNQ2-201ENST00000344425 HNRNPLP14866 589 aaKnown RBP eCLIP21.27■■□□□ 1
KCNQ2-201ENST00000344425 DPP6P42658 865 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 KIR2DL1P43626 348 aaPredicted RBP21.27■■□□□ 1
KCNQ2-201ENST00000344425 MYL6P60660 151 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 IRX4P78413 519 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 SPDYCQ5MJ68 293 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 LY6G5CQ5SRR4 150 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 HECTD3Q5T447 861 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 C12orf40Q86WS4 652 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 NELFCDQ8IXH7 590 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 RLN3Q8WXF3 142 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 ZNF396Q96N95 335 aaPredicted RBP21.27■■□□□ 1
KCNQ2-201ENST00000344425 NUSAP1Q9BXS6 441 aaKnown RBP21.27■■□□□ 1
KCNQ2-201ENST00000344425 SH3BP1Q9Y3L3 701 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 THADAQ6YHU6 1953 aa21.27■■□□□ 1
KCNQ2-201ENST00000344425 ZFHX4Q86UP3 3567 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 NUP205Q92621 2012 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 KDSRQ06136 332 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 EMC10Q5UCC4 262 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 UNC13DQ70J99 1090 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 TRMT11Q7Z4G4 463 aaKnown RBP21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 SFTPA1Q8IWL2 248 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 PGBD3Q8N328 593 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 KCNV2Q8TDN2 545 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 SCFD1Q8WVM8 642 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 ZNF516Q92618 1163 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 TNIP3Q96KP6 325 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 MED10Q9BTT4 135 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 XYLT2Q9H1B5 865 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 MAGEF1Q9HAY2 307 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 COMMD8Q9NX08 183 aa21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 CHORDC1Q9UHD1 332 aaPredicted RBP21.26■□□□□ 0.99
KCNQ2-201ENST00000344425 TBC1D3BA6NDS4 549 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 COCHO43405 550 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 CUTAO60888 179 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 CLSTN1O94985 981 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 TUBP50607 506 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 MESP2Q0VG99 397 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 FOXC1Q12948 553 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 UAP1L1Q3KQV9 507 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 TRIM61Q5EBN2 209 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 SNX30Q5VWJ9 437 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 SYT12Q8IV01 421 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 C12orf56Q8IXR9 622 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 HMGB4Q8WW32 186 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 KCNK16Q96T55 309 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 VRTNQ9H8Y1 702 aa21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 TFIP11Q9UBB9 837 aaKnown RBP21.25■□□□□ 0.99
KCNQ2-201ENST00000344425 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 EXOC3O60645 756 aa21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 AP3M2P53677 418 aa21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 TMEFF1Q8IYR6 380 aa21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 DUSP9Q99956 384 aaKnown RBP21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 DMAP1Q9NPF5 467 aaPredicted RBP21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 DEC1Q9P2X7 70 aa21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 CFAP47Q6ZTR5 3102 aa21.24■□□□□ 0.99
KCNQ2-201ENST00000344425 TCRBV21S2A2A0A5A6 115 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 HOXC11O43248 304 aaPredicted RBP21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 YEATS4O95619 227 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 CHRM1P11229 460 aaPredicted RBP21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 SLC5A3P53794 718 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 EHHADHQ08426 723 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 BIRC3Q13489 604 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 ZNF699Q32M78 642 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 ZNF667Q5HYK9 610 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 UNQ6494/PRO21346Q6UXR6 183 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 ARMCX6Q7L4S7 300 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 FAM35AQ86V20 835 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 PHTF2Q8N3S3 785 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 SCAMP5Q8TAC9 235 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 SMARCD1Q96GM5 515 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 ZFRQ96KR1 1074 aaKnown RBP21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 NACA2Q9H009 215 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 GZF1Q9H116 711 aaPredicted RBP21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 FOXD4L1Q9NU39 408 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 IL37Q9NZH6 218 aa21.23■□□□□ 0.99
KCNQ2-201ENST00000344425 PVALEFA0A1B0GWK0 134 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms