RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CLEC20AQ6ZU45 233 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 KIAA1958Q8N8K9 716 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 TATDN2Q93075 761 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 JAKMIP2Q96AA8 810 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 ARID3AQ99856 593 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 NACA2Q9H009 215 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 SEMA4AQ9H3S1 761 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 SMPD4Q9NXE4 827 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 GMIPQ9P107 970 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 CHORDC1Q9UHD1 332 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-201ENST00000344376 GREB1Q4ZG55 1949 aa16.99■□□□□ 0.31
ATG4B-201ENST00000344376 FAM92AA1XBS5 289 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 SLC9A3R1O14745 358 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 PMM2O15305 246 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 CCR3P51677 355 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 SLC8A3P57103 927 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 GRSF1Q12849 480 aaKnown RBP eCLIP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 SNX30Q5VWJ9 437 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 MAML2Q8IZL2 1156 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 SYNPOQ8N3V7 929 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 DUSP16Q9BY84 665 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 RNF38Q9H0F5 515 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 TLR8Q9NR97 1041 aaKnown RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 KIF26AQ9ULI4 1882 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 F5P12259 2224 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 P4HA2O15460 535 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 ZDHHC11BP0C7U3 371 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 LRMPQ12912 555 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 EML3Q32P44 896 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 PPP1R26Q5T8A7 1209 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 MAMSTRQ6ZN01 415 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 SLC4A11Q8NBS3 891 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 SRRTQ9BXP5 876 aaKnown RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 CLSTN2Q9H4D0 955 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 PRMT8Q9NR22 394 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-201ENST00000344376 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
ATG4B-201ENST00000344376 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
ATG4B-201ENST00000344376 COCHO43405 550 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 ACO1P21399 889 aaKnown RBP16.97■□□□□ 0.31
ATG4B-201ENST00000344376 GJA4P35212 333 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 RAD23BP54727 409 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 ARHGAP17Q68EM7 881 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 SPEM1Q8N4L4 309 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 RBM12Q9NTZ6 932 aaKnown RBP16.97■□□□□ 0.31
ATG4B-201ENST00000344376 CFAP97Q9P2B7 532 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 SCML2Q9UQR0 700 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.97■□□□□ 0.31
ATG4B-201ENST00000344376 R4GN57 208 aa16.97■□□□□ 0.31
ATG4B-201ENST00000344376 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 OTOL1A6NHN0 477 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-201ENST00000344376 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
ATG4B-201ENST00000344376 AFPP02771 609 aaKnown RBP16.96■□□□□ 0.31
ATG4B-201ENST00000344376 MARSP56192 900 aaKnown RBP16.96■□□□□ 0.31
ATG4B-201ENST00000344376 CCINQ13939 588 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 TMEM196Q5HYL7 178 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 MLKLQ8NB16 471 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 FAM126AQ9BYI3 521 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-201ENST00000344376 CCSER2Q9H7U1 834 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 SH3BP1Q9Y3L3 701 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 PCDHGA2Q9Y5H1 932 aa16.96■□□□□ 0.31
ATG4B-201ENST00000344376 ANAPC1Q9H1A4 1944 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 HHLA1C9JL84 531 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 CYP26A1O43174 497 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 TLR5O60602 858 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 CD19P15391 556 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 CXCL12P48061 93 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 NRLP54845 237 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 ZXDBP98169 803 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 SGO2Q562F6 1265 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 GPRIN1Q7Z2K8 1008 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 PPM1KQ8N3J5 372 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 ZSCAN32Q9NX65 697 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 HESX1Q9UBX0 185 aa16.95■□□□□ 0.3
ATG4B-201ENST00000344376 PATJQ8NI35 1801 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 E2F8A0AVK6 867 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 DRD1P21728 446 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 PSEN1P49768 467 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 KIF11P52732 1056 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 CLEC17AQ6ZS10 378 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 Q6ZS52 159 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 ASCL5Q7RTU5 278 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 TADA2BQ86TJ2 420 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 ANKRD52Q8NB46 1076 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 CD101Q93033 1021 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 GBP4Q96PP9 640 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 NUP62CLQ9H1M0 184 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 LINC00597Q9H2U6 94 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 KIAA1257Q9ULG3 409 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 LMNAP02545 664 aaKnown RBP16.94■□□□□ 0.3
ATG4B-201ENST00000344376 BCAT1P54687 386 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms