RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 CHD4Q14839 1912 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 MYH10P35580 1976 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
LRRK2-202ENST00000343742 ODC1P11926 461 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 MBTD1Q05BQ5 628 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 MCL1Q07820 350 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 OVGP1Q12889 678 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 TSTA3Q13630 321 aaPredicted RBP12.98□□□□□ -0.33
LRRK2-202ENST00000343742 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
LRRK2-202ENST00000343742 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 VGLL3A8MV65 326 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 RIPK2O43353 540 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 TTC4O95801 387 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 RASSF2P50749 326 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 TAF5Q15542 800 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 RASSF3Q86WH2 238 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 NUDCD3Q8IVD9 361 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 LRRC34Q8IZ02 419 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 FIZ1Q96SL8 496 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 ABCF3Q9NUQ8 709 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PRKAG2Q9UGJ0 569 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PTPRJQ12913 1337 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 USP12O75317 370 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PAEPP09466 180 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PCK1P35558 622 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 CHKAP35790 457 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 YWHAZP63104 245 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 CNGA2Q16280 664 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 SLC10A6Q3KNW5 377 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 IL31Q6EBC2 164 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 CES3Q6UWW8 571 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PCYT2Q99447 389 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 HMGXB4Q9UGU5 601 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 MMP8P22894 467 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 RPS6KA2Q15349 733 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 OVOS1Q6IE37 1185 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PIGZQ86VD9 579 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 HIPK4Q8NE63 616 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 NUDCD1Q96RS6 583 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 ELOVL4Q9GZR5 314 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 NPHS2Q9NP85 383 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 WHRNQ9P202 907 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PSMC3IPQ9P2W1 217 aaPredicted RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 FAM47DPA6NHR8 397 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 FOXO6A8MYZ6 492 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 H0Y3Z8 333 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 KDELR1P24390 212 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 DNAJB2P25686 324 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 RBL1P28749 1068 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 STIP1P31948 543 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 AGBL2Q5U5Z8 902 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 LVRNQ6Q4G3 990 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 HDAC11Q96DB2 347 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 SARS2Q9NP81 518 aaKnown RBP12.97□□□□□ -0.33
LRRK2-202ENST00000343742 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
LRRK2-202ENST00000343742 CFAP69A5D8W1 941 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SIGLEC16A6NMB1 481 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 ERBB2P04626 1255 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SERPINB6P35237 376 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 ASPHQ12797 758 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 BMPR2Q13873 1038 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SNX17Q15036 470 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SDHAF4Q5VUM1 108 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 TRIM68Q6AZZ1 485 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 ATPAF2Q8N5M1 289 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SLITRK1Q96PX8 696 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 PCDHB7Q9Y5E2 793 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.33
LRRK2-202ENST00000343742 BTNL10A8MVZ5 291 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 TRIM49D1C9J1S8 452 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 TSPAN1O60635 241 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 ENDOD1O94919 500 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 C22orf31O95567 290 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 JCHAINP01591 159 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 RPSAP08865 295 aaKnown RBP12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SLC6A3Q01959 620 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 ARHGAP1Q07960 439 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 NAA25Q14CX7 972 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
LRRK2-202ENST00000343742 SEC16BQ96JE7 1060 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 NAALADL1Q9UQQ1 740 aa12.96□□□□□ -0.33
LRRK2-202ENST00000343742 EFEMP1Q12805 493 aa12.96□□□□□ -0.34
LRRK2-202ENST00000343742 SLC12A1Q13621 1099 aa12.96□□□□□ -0.34
LRRK2-202ENST00000343742 PDK1Q15118 436 aa12.96□□□□□ -0.34
LRRK2-202ENST00000343742 PCSK9Q8NBP7 692 aaKnown RBP12.96□□□□□ -0.34
LRRK2-202ENST00000343742 RMDN1Q96DB5 314 aa12.96□□□□□ -0.34
LRRK2-202ENST00000343742 IFT43Q96FT9 208 aa12.96□□□□□ -0.34
LRRK2-202ENST00000343742 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.34
LRRK2-202ENST00000343742 SMIM28A0A1B0GU29 152 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms