RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 DDNO94850 711 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 LDHAP00338 332 aaKnown RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 ALOX5P09917 674 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 FGFR1P11362 822 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 EEF2P13639 858 aaKnown RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 PSMC3P17980 439 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 FMO5P49326 533 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 SIK1P57059 783 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 OASLQ15646 514 aaKnown RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 GSTA5Q7RTV2 222 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 TTC7BQ86TV6 843 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 CRLF3Q8IUI8 442 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 CENPSQ8N2Z9 138 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF276Q8N554 614 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 USP6NLQ92738 828 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 PLEKHA8Q96JA3 519 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 CNBD2Q96M20 576 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 ANO3Q9BYT9 981 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 INTS2Q9H0H0 1204 aaKnown RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 TRNAU1APQ9NX07 287 aaKnown RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-201ENST00000343524 ARMCX1Q9P291 453 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 SEPT3Q9UH03 358 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 MAD2L2Q9UI95 211 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 SUGT1Q9Y2Z0 365 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 ATRNL1Q5VV63 1379 aa8.45□□□□□ -1.06
ATG4A-201ENST00000343524 WDR91A4D1P6 747 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CAPN8A6NHC0 703 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 SPTLC1O15269 473 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ALOX15BO15296 676 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 EIF3DO15371 548 aaKnown RBP eCLIP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 MARCH6O60337 910 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 NOL3O60936 208 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ASTN2O75129 1339 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 BMP10O95393 424 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 MT-ND3P03897 115 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CPOXP36551 454 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 HNRNPFP52597 415 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 STAT2P52630 851 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PSMC1P62191 440 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 SCN7AQ01118 1682 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 MYL7Q01449 175 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 WASHC5Q12768 1159 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PDIA2Q13087 525 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ITPK1Q13572 414 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 TRIP13Q15645 432 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ARL13BQ3SXY8 428 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ERFEQ4G0M1 354 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PGM2L1Q6PCE3 622 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 STXBP4Q6ZWJ1 553 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 GPR141Q7Z602 305 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ALYREFQ86V81 257 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 KBTBD6Q86V97 674 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 LRRC49Q8IUZ0 686 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 SLC25A41Q8N5S1 370 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 NLRP7Q8WX94 980 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CMTM5Q96DZ9 223 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 THAP11Q96EK4 314 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CLPTM1LQ96KA5 538 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CCDC85AQ96PX6 553 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 DHRS4Q9BTZ2 278 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 NUP85Q9BW27 656 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 OSBPL10Q9BXB5 764 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 IMPG2Q9BZV3 1241 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 INO80BQ9C086 356 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 HIPK3Q9H422 1215 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CHST7Q9NS84 486 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 BAZ2AQ9UIF9 1905 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CDH22Q9UJ99 828 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 APPL1Q9UKG1 709 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 SATB2Q9UPW6 733 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 IKBKGQ9Y6K9 419 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 CACNA1SQ13698 1873 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 LAMB2P55268 1798 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 F5H6K3 240 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 AOC2O75106 756 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 SIN3BO75182 1162 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 RBP3P10745 1247 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 GAP43P17677 238 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 KLRC2P26717 231 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 TKTP29401 623 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 HOXA10P31260 410 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 GSSP48637 474 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 HIRAP54198 1017 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 MECOMQ03112 1051 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ADGRE1Q14246 886 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF362Q5T0B9 420 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 GJB7Q6PEY0 223 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 KCNK18Q7Z418 384 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ETNPPLQ8TBG4 499 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 USP33Q8TEY7 942 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 FAM89AQ96GI7 184 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PRR11Q96HE9 360 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms