RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.47■□□□□ 0.71
HOXA9-201ENST00000343483 PADI3Q9ULW8 664 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 SMIM23A6NLE4 172 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 TRIM66O15016 1216 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 ATP2C2O75185 946 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 WARSP23381 471 aaKnown RBP19.47■□□□□ 0.71
HOXA9-201ENST00000343483 ACAT1P24752 427 aaKnown RBP19.47■□□□□ 0.71
HOXA9-201ENST00000343483 KLRC2P26717 231 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 SDC4P31431 198 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 VCPP55072 806 aaKnown RBP19.47■□□□□ 0.71
HOXA9-201ENST00000343483 CCDC142Q17RM4 750 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 RFX6Q8HWS3 928 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 C10orf67Q8IYJ2 551 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 CMASQ8NFW8 434 aaPredicted RBP19.47■□□□□ 0.71
HOXA9-201ENST00000343483 CLEC4CQ8WTT0 213 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 PGM2Q96G03 612 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 TRMT13Q9NUP7 481 aaKnown RBP19.47■□□□□ 0.71
HOXA9-201ENST00000343483 EFR3BQ9Y2G0 817 aa19.47■□□□□ 0.71
HOXA9-201ENST00000343483 CST5P28325 142 aaPredicted RBP19.46■□□□□ 0.71
HOXA9-201ENST00000343483 TKTP29401 623 aaKnown RBP19.46■□□□□ 0.71
HOXA9-201ENST00000343483 CHKAP35790 457 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 SCNN1GP51170 649 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 CORO7P57737 925 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 CAV1Q03135 178 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 P3H1Q32P28 736 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 IZUMO3Q5VZ72 239 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 SCYL2Q6P3W7 929 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 RHBDF2Q6PJF5 856 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 B4GALNT4Q76KP1 1039 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 ZDHHC17Q8IUH5 632 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 ALLCQ8N6M5 410 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 GLIS1Q8NBF1 620 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 MYCBPAPQ8TBZ2 947 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 ZNF473Q8WTR7 871 aaKnown RBP19.46■□□□□ 0.71
HOXA9-201ENST00000343483 FAM172AQ8WUF8 416 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 CCT8L2Q96SF2 557 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 TMEM121Q9BTD3 319 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 FAM107BQ9H098 131 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 DNAJC17Q9NVM6 304 aaKnown RBP19.46■□□□□ 0.71
HOXA9-201ENST00000343483 PTCH2Q9Y6C5 1203 aa19.46■□□□□ 0.71
HOXA9-201ENST00000343483 RGS16O15492 202 aaPredicted RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 ZSCAN5DPP0CG00 497 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 DESP17661 470 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CLCNKBP51801 687 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CDH6P55285 790 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 OTUD4Q01804 1114 aaKnown RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 ITGA7Q13683 1181 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 TAZQ16635 292 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 AGMOQ6ZNB7 445 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 BBS12Q6ZW61 710 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CROCCP2Q86T23 111 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 BBOF1Q8ND07 529 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 ACTL9Q8TC94 416 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 KHSRPQ92945 711 aaKnown RBP eCLIP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 NKD2Q969F2 451 aaPredicted RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CNOT10Q9H9A5 744 aaKnown RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 AAASQ9NRG9 546 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 MIOSQ9NXC5 875 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 SRRDQ9UH36 339 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 SGK1O00141 431 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 DPYSL4O14531 572 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 ETS1P14921 441 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 ARSEP51690 589 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 OASLQ15646 514 aaKnown RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 C6orf118Q5T5N4 469 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CYP4V2Q6ZWL3 525 aaPredicted RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 TRMT10CQ7L0Y3 403 aaKnown RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 RNF180Q86T96 592 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CCHCR1Q8TD31 782 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 SENP8Q96LD8 212 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 DDX20Q9UHI6 824 aaKnown RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 DRG1Q9Y295 367 aaKnown RBP19.45■□□□□ 0.7
HOXA9-201ENST00000343483 GIT1Q9Y2X7 761 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 FAM169AQ9Y6X4 670 aa19.45■□□□□ 0.7
HOXA9-201ENST00000343483 CASTOR2A6NHX0 329 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 MGEA5O60502 916 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 FAM107AO95990 144 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 MYCP01106 439 aaPredicted RBP19.44■□□□□ 0.7
HOXA9-201ENST00000343483 IFNB1P01574 187 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 ITGAVP06756 1048 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 MMRN1Q13201 1228 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 TTC13Q8NBP0 860 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 SLC35B2Q8TB61 432 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 EPS8L3Q8TE67 593 aaKnown RBP19.44■□□□□ 0.7
HOXA9-201ENST00000343483 TMEM109Q9BVC6 243 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 CLDN5O00501 218 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 PTPN1P18031 435 aaKnown RBP19.44■□□□□ 0.7
HOXA9-201ENST00000343483 SLC8A3P57103 927 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 LPIN1Q14693 890 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 FUKQ8N0W3 1084 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 PWWP2AQ96N64 755 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 MAK16Q9BXY0 300 aaKnown RBP19.44■□□□□ 0.7
HOXA9-201ENST00000343483 TSPYL1Q9H0U9 437 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 CDC42EP4Q9H3Q1 356 aaKnown RBP19.44■□□□□ 0.7
HOXA9-201ENST00000343483 RSAD1Q9HA92 442 aa19.44■□□□□ 0.7
HOXA9-201ENST00000343483 GMNCA6NCL1 334 aa19.43■□□□□ 0.7
HOXA9-201ENST00000343483 TRAPPC3O43617 180 aa19.43■□□□□ 0.7
HOXA9-201ENST00000343483 HOXD10P28358 340 aa19.43■□□□□ 0.7
HOXA9-201ENST00000343483 ACADSBP45954 432 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms