RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SEZ6Q53EL9 994 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 ATG16L1Q676U5 607 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 LRRC8BQ6P9F7 803 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 TSHZ1Q6ZSZ6 1077 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 NDUFAF2Q8N183 169 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 CSRNP1Q96S65 589 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 IP6K2Q9UHH9 426 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 HBS1LQ9Y450 684 aaKnown RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 CD1EP15812 388 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 KCNA4P22459 653 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 CYP24A1Q07973 514 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 TBL3Q12788 808 aaKnown RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 STX3Q13277 289 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 SH3D19Q5HYK7 790 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 C6orf52Q5T4I8 152 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 DNAJC24Q6P3W2 148 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 RFX6Q8HWS3 928 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 SLC44A1Q8WWI5 657 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 PARVAQ9NVD7 372 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 PTTG2Q9NZH5 202 aa15.46■□□□□ 0.07
CLCN1-201ENST00000343257 ZNFX1Q9P2E3 1918 aaKnown RBP15.46■□□□□ 0.07
CLCN1-201ENST00000343257 CDKN2BP42772 138 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 RPL5P46777 297 aaKnown RBP15.46■□□□□ 0.06
CLCN1-201ENST00000343257 ALDH1A3P47895 512 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 SP4Q02446 784 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 TAF5Q15542 800 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 CNGA3Q16281 694 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 ABRAQ8N0Z2 381 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 POMPQ9Y244 141 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 DRG1Q9Y295 367 aaKnown RBP15.46■□□□□ 0.06
CLCN1-201ENST00000343257 PLLPQ9Y342 182 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 PCDHGA4Q9Y5G9 962 aa15.46■□□□□ 0.06
CLCN1-201ENST00000343257 TTC36A6NLP5 189 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 ITGAVP06756 1048 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 FDFT1P37268 417 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 MAGEA8P43361 318 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 COPAP53621 1224 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 GTF2BQ00403 316 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 SLC18A2Q05940 514 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CYLC2Q14093 348 aaPredicted RBP15.45■□□□□ 0.06
CLCN1-201ENST00000343257 SLC39A4Q6P5W5 647 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 AMIGO2Q86SJ2 522 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 HSPH1Q92598 858 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 DCUN1D1Q96GG9 259 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CATSPER2Q96P56 530 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 MAN1C1Q9NR34 630 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CDH22Q9UJ99 828 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 ZNF232Q9UNY5 417 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 FOXD2O60548 495 aaPredicted RBP15.45■□□□□ 0.06
CLCN1-201ENST00000343257 ATP2B4P23634 1241 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
CLCN1-201ENST00000343257 GTF2H1P32780 548 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 SPP2Q13103 211 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 PLEKHA7Q6IQ23 1121 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CCDC33Q8N5R6 958 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CCDC28BQ9BUN5 200 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CALN1Q9BXU9 219 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 KMT5AQ9NQR1 393 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 PNPOQ9NVS9 261 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 COQ4Q9Y3A0 265 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 MAD1L1Q9Y6D9 718 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 CDK5RAP2Q96SN8 1893 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 ZNF536O15090 1300 aa15.45■□□□□ 0.06
CLCN1-201ENST00000343257 G3V3G9 751 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 ITGB5P18084 799 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 HSPA1LP34931 641 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 NPTX2P47972 431 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 CBX3Q13185 183 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 GRM2Q14416 872 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 KLC3Q6P597 504 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 IL31RAQ8NI17 732 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 BSNDQ8WZ55 320 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 PPCSQ9HAB8 311 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 APOBEC3GQ9HC16 384 aaKnown RBP15.44■□□□□ 0.06
CLCN1-201ENST00000343257 XAB2Q9HCS7 855 aaKnown RBP15.44■□□□□ 0.06
CLCN1-201ENST00000343257 ACSS2Q9NR19 701 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 KCND2Q9NZV8 630 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SLC17A6Q9P2U8 582 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 TJP2Q9UDY2 1190 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SCINQ9Y6U3 715 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 XPO1O14980 1071 aaKnown RBP15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SERPINA6P08185 405 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SRGAP2CP0DJJ0 459 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SRGAP2BP0DMP2 458 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 EIF3EP60228 445 aaKnown RBP15.44■□□□□ 0.06
CLCN1-201ENST00000343257 TMEM259Q4ZIN3 620 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 TATDN1Q6P1N9 297 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SH2D5Q6ZV89 423 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 PCGF5Q86SE9 256 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 EMC1Q8N766 993 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 FAF2Q96CS3 445 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 SIKE1Q9BRV8 207 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 NYAP2Q9P242 653 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 TCEAL9Q9UHQ7 104 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 A0A0B4J269 797 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 CFLARO15519 480 aa15.44■□□□□ 0.06
CLCN1-201ENST00000343257 ATP9BO43861 1147 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms