RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 EMILIN2Q9BXX0 1053 aa20.33■□□□□ 0.84
SEMA6C-201ENST00000341697 IGKV6D-41A0A0C4DH26 115 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 GYG2O15488 501 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 ADRB2P07550 413 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 HIBCHQ6NVY1 386 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 TRIM15Q9C019 465 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 TSPYL2Q9H2G4 693 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 SYF2O95926 243 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 YWHAQP27348 245 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 ERMARDQ5T6L9 678 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 MFN1Q8IWA4 741 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 SPDL1Q96EA4 605 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 FTHL17Q9BXU8 183 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 ALG13Q9NP73 1137 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 L3MBTL1Q9Y468 752 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 TUFMP49411 452 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 RGS4P49798 205 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 NCKAP1LP55160 1127 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 ZRANB3Q5FWF4 1079 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 NLRP14Q86W24 1093 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 UNC93AQ86WB7 457 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 RHOCP08134 193 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 MTA1Q13330 715 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 UROC1Q96N76 676 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 GPR20Q99678 358 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 CENPKQ9BS16 269 aa20.32■□□□□ 0.84
SEMA6C-201ENST00000341697 FZD9O00144 591 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 RTN3O95197 1032 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 C4orf33Q8N1A6 199 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 C4orf32Q8N8J7 132 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 PCMTD2Q9NV79 361 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 LRRC55Q6ZSA7 311 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 RIBC1Q8N443 379 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 TASP1Q9H6P5 420 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 ZCCHC17Q9NP64 241 aaKnown RBP20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 VPS28Q9UK41 221 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 DDX3XO00571 662 aaKnown RBP eCLIP20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 TRADDQ15628 312 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 SLC39A12Q504Y0 691 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 CHST12Q9NRB3 414 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 HES2Q9Y543 173 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 SLC4A7Q9Y6M7 1214 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 NFICP08651 508 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 HSDL1Q3SXM5 330 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 DNAAF5Q86Y56 855 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 SLC25A13Q9UJS0 675 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 VPS9D1Q9Y2B5 631 aa20.31■□□□□ 0.84
SEMA6C-201ENST00000341697 COL1A2P08123 1366 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 NCAM2O15394 837 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 KCNA2P16389 499 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 TBX4P57082 545 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 CCNG2Q16589 344 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 TTC39BQ5VTQ0 682 aaPredicted RBP20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 SZRD1Q7Z422 152 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 CCNJLQ8IV13 435 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 AVENQ9NQS1 362 aaPredicted RBP20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 DLG5Q8TDM6 1919 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 KLRG2A4D1S0 409 aaPredicted RBP20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 OPHN1O60890 802 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 SCUBE3Q8IX30 993 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 KIRREL3Q8IZU9 778 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 MORC2Q9Y6X9 1032 aaPredicted RBP20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 C2orf81A6NN90 581 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 OR2W6PQ8NHA6 318 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 SGSM3Q96HU1 749 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 UBXN6Q9BZV1 441 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 BTBD7Q9P203 1132 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 SIK3Q9Y2K2 1263 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 WNT7AO00755 349 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 CCDC22O60826 627 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 CYP2F1P24903 491 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 SLC6A3Q01959 620 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 AGBL2Q5U5Z8 902 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 AGR3Q8TD06 166 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 BLOC1S5Q8TDH9 187 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 SERPINB11Q96P15 392 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 CRLS1Q9UJA2 301 aa20.3■□□□□ 0.84
SEMA6C-201ENST00000341697 TBX2Q13207 712 aaPredicted RBP20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 NBPF20Q3BBV1 942 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 WWP1Q9H0M0 922 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 A0A0G2JLL6 359 aaPredicted RBP20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 FAM47DPA6NHR8 397 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 ECM1Q16610 540 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 NFIL3Q16649 462 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 COBLL1Q53SF7 1204 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 NOL9Q5SY16 702 aaKnown RBP20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 PRRT2Q7Z6L0 340 aaPredicted RBP20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 MSL3Q8N5Y2 521 aaKnown RBP20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 NCLNQ969V3 563 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 SMYD3Q9H7B4 428 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 ST3GAL5Q9UNP4 418 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 MMP3P08254 477 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 CCDC130P13994 396 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 TGM2P21980 687 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 BMT2Q1RMZ1 405 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 TMEM199Q8N511 208 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 C2CD2Q9Y426 696 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms