RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 XPO1O14980 1071 aaKnown RBP20.23■□□□□ 0.83
SYNE4-202ENST00000340477 MED7O43513 233 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 MBL2P11226 248 aaPredicted RBP20.23■□□□□ 0.83
SYNE4-202ENST00000340477 PSEN1P49768 467 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 KPNA1P52294 538 aaPredicted RBP20.23■□□□□ 0.83
SYNE4-202ENST00000340477 MTF1Q14872 753 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 ARHGAP44Q17R89 818 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 C1orf228Q6PIY5 440 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 LCLAT1Q6UWP7 414 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 GPRIN1Q7Z2K8 1008 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 TADA2BQ86TJ2 420 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 PIGZQ86VD9 579 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 KMT2EQ8IZD2 1858 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 ARHGAP18Q8N392 663 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 AOPEPQ8N6M6 819 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 LRRC4Q9HBW1 653 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 HEBP1Q9NRV9 189 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 ZDBF2Q9HCK1 2354 aa20.23■□□□□ 0.83
SYNE4-202ENST00000340477 MIA3Q5JRA6 1907 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 HHLA1C9JL84 531 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 M0QYV0 167 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 CYP26A1O43174 497 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 OAS1P00973 400 aaKnown RBP20.22■□□□□ 0.83
SYNE4-202ENST00000340477 GLULP15104 373 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 BRD2P25440 801 aaKnown RBP20.22■□□□□ 0.83
SYNE4-202ENST00000340477 IFNAR2P48551 515 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 KIF11P52732 1056 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 ZNF132P52740 706 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 STARD6P59095 220 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 SLC7A9P82251 487 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 USP4Q13107 963 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 PDGFRLQ15198 375 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 KRT31Q15323 416 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 CNGA2Q16280 664 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 SNX30Q5VWJ9 437 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 ZNF852Q6ZMS4 543 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 TTC30AQ86WT1 665 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 SIX6OS1Q8N1H7 587 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 SH3RF2Q8TEC5 729 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 SLC22A12Q96S37 553 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 CDK5RAP1Q96SZ6 601 aaKnown RBP20.22■□□□□ 0.83
SYNE4-202ENST00000340477 PRRX2Q99811 253 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 VPS16Q9H269 839 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.22■□□□□ 0.83
SYNE4-202ENST00000340477 CPQQ9Y646 472 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 PIAS3Q9Y6X2 628 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 COL4A2P08572 1712 aa20.22■□□□□ 0.83
SYNE4-202ENST00000340477 KANSL1LA0AUZ9 987 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 ZDHHC11BP0C7U3 371 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 TCF3P15923 654 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 AOC1P19801 751 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 COL9A1P20849 921 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 AVPR2P30518 371 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 GNA15P30679 374 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 PDE4CQ08493 712 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 GOLGA8FQ08AF8 430 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 GOLGA8DPQ0D2H9 430 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 UBXN2BQ14CS0 331 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 ZNF77Q15935 545 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 CWF19L1Q69YN2 538 aaKnown RBP20.21■□□□□ 0.83
SYNE4-202ENST00000340477 GJB7Q6PEY0 223 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 CCDC186Q7Z3E2 898 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 ZFYVE19Q96K21 471 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 BPIFA3Q9BQP9 254 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 C8orf33Q9H7E9 229 aaPredicted RBP20.21■□□□□ 0.83
SYNE4-202ENST00000340477 NAGPAQ9UK23 515 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 DNAJC12Q9UKB3 198 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 CNTN6Q9UQ52 1028 aa20.21■□□□□ 0.83
SYNE4-202ENST00000340477 SYCE3A1L190 88 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 BECN2A8MW95 431 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 NCAM2O15394 837 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 THAP12O43422 761 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 TLR5O60602 858 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 OLFM2O95897 454 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 RALAP11233 206 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 PLA2G4AP47712 749 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 TKTL1P51854 596 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 NUBP1P53384 320 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 MLLT6P55198 1093 aaPredicted RBP20.2■□□□□ 0.82
SYNE4-202ENST00000340477 AMPD2Q01433 879 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 ITPRIPL2Q3MIP1 535 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 CPA6Q8N4T0 437 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 UBA3Q8TBC4 463 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 OSCP1Q8WVF1 389 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 TFAP2BQ92481 460 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 ATP2A3Q93084 1043 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 LRRC3BQ96PB8 259 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 NELL2Q99435 816 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 LSM14BQ9BX40 385 aaKnown RBP20.2■□□□□ 0.82
SYNE4-202ENST00000340477 KCNH6Q9H252 994 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 CCSER2Q9H7U1 834 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 GKN1Q9NS71 199 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 DUS2Q9NX74 493 aaKnown RBP20.2■□□□□ 0.82
SYNE4-202ENST00000340477 SMPD4Q9NXE4 827 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 SIT1Q9Y3P8 196 aa20.2■□□□□ 0.82
SYNE4-202ENST00000340477 A0A1W2PQH9 124 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 RNF225M0QZC1 329 aaPredicted RBP20.19■□□□□ 0.82
SYNE4-202ENST00000340477 LEFTY2O00292 366 aa20.19■□□□□ 0.82
SYNE4-202ENST00000340477 ARNTLO00327 626 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms