RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 M0QYT0 321 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 LZTS3O60299 673 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 ZBTB7AO95365 584 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 GPD1P21695 349 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 KCNK10P57789 538 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 SLC34A1Q06495 639 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 TMEM132DQ14C87 1099 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 R3HDM1Q15032 1099 aaKnown RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 NFIL3Q16649 462 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 GOLGA7BQ2TAP0 167 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 XKR3Q5GH77 459 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 BNC2Q6ZN30 1099 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 ZNF513Q8N8E2 541 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 PPP1R13LQ8WUF5 828 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 EMID1Q96A84 441 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 MASTLQ96GX5 879 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 TBC1D10AQ9BXI6 508 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 ACAD9Q9H845 621 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 NEXMIFQ5QGS0 1516 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 SALL3Q9BXA9 1300 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 KBTBD13C9JR72 458 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 RNF103O00237 685 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 WNT7AO00755 349 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 USP1O94782 785 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 JCHAINP01591 159 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 RFX3P48380 749 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 PTDSS1P48651 473 aaKnown RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 CASP5P51878 434 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 CDH8P55286 799 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 RUNX1T1Q06455 604 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 TRAF2Q12933 501 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 MRPL28Q13084 256 aaKnown RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 CUL2Q13617 745 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 CLEC16AQ2KHT3 1053 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 N4BP2L1Q5TBK1 243 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 PDPK2PQ6A1A2 396 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 RIPOR1Q6ZS17 1223 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 MIB1Q86YT6 1006 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 ZNF75CPQ92670 426 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 CELF6Q96J87 481 aaKnown RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 KATNAL1Q9BW62 490 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 NT5C1AQ9BXI3 368 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 EFCAB1Q9HAE3 211 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 DDIT4Q9NX09 232 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 FAM32AQ9Y421 112 aaKnown RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 MYL6P60660 151 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 CBWD6Q4V339 395 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 TFDP3Q5H9I0 405 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 CBWD3Q5JTY5 395 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 CBWD5Q5RIA9 395 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 NT5DC3Q86UY8 548 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 ADAM32Q8TC27 787 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 SYN2Q92777 582 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 DTNBP1Q96EV8 351 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 HPDLQ96IR7 371 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 DGCR6LQ9BY27 220 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 NIF3L1Q9GZT8 377 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 GPRC5DQ9NZD1 345 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 NFKBIL1Q9UBC1 381 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 TJP2Q9UDY2 1190 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 INPP4BO15327 924 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 DYNC1LI2O43237 492 aaPredicted RBP8.98□□□□□ -0.97
RTN3-202ENST00000339997 ATP4AP20648 1035 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 MAGP20916 626 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 SERPINB9P50453 376 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 TNFAIP2Q03169 654 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 POU6F1Q14863 301 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 ARHGEF6Q15052 776 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 ZRANB3Q5FWF4 1079 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 ARHGAP22Q7Z5H3 698 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 MFN1Q8IWA4 741 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 THEM5Q8N1Q8 247 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 DNAJC18Q9H819 358 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 TAGLN3Q9UI15 199 aa8.98□□□□□ -0.97
RTN3-202ENST00000339997 H0YC42 278 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 SNX3O60493 162 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 IRF1P10914 325 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 CPA3P15088 417 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 PSMB9P28065 219 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 GSTT1P30711 240 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 AKT1P31749 480 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 CLCN3P51790 818 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 SEC23AQ15436 765 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 PLEKHM3Q6ZWE6 761 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 ATG4CQ96DT6 458 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 SRPK1Q96SB4 655 aaKnown RBP8.97□□□□□ -0.97
RTN3-202ENST00000339997 SH3GL2Q99962 352 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 BTBD10Q9BSF8 475 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 ZNF682O95780 498 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 PPARGP37231 505 aaPredicted RBP8.97□□□□□ -0.97
RTN3-202ENST00000339997 NPTX2P47972 431 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 CENPCQ03188 943 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 ITGB3BPQ13352 177 aaPredicted RBP8.97□□□□□ -0.97
RTN3-202ENST00000339997 PERM1Q5SV97 790 aa8.97□□□□□ -0.97
RTN3-202ENST00000339997 RNF219Q5W0B1 726 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms