RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TEX33O43247 280 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 GRK4P32298 578 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ACAP1Q15027 740 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 PYHIN1Q6K0P9 492 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 NEK5Q6P3R8 708 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 AGPAT1Q99943 283 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 SRP68Q9UHB9 627 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 RBM7Q9Y580 266 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 TGM2P21980 687 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 JAK3P52333 1124 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ITIH4Q14624 930 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 SPATA2LQ8IUW3 424 aaPredicted RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 IPCEF1Q8WWN9 437 aaPredicted RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 SLC35C2Q9NQQ7 365 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 MYRFQ9Y2G1 1151 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 GLRBP48167 497 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 ZCCHC8Q6NZY4 707 aaKnown RBP13.24□□□□□ -0.29
USP47-202ENST00000339865 PADI6Q6TGC4 694 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 LRRC74BQ6ZQY2 392 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 COLGALT2Q8IYK4 626 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 MAP4K1Q92918 833 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 RFT1Q96AA3 541 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 TRIM10Q9UDY6 481 aa13.24□□□□□ -0.29
USP47-202ENST00000339865 PRRG1O14668 218 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 PPP2R1BP30154 601 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 ZNF613Q6PF04 617 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CAMKK1Q8N5S9 505 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 MOV10L1Q9BXT6 1211 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 METTL5Q9NRN9 209 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 MLXQ9UH92 298 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 PFDN2Q9UHV9 154 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 HOXC9P31274 260 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 RFC5P40937 340 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CCNG1P51959 295 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 NR1D2Q14995 579 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 FGD3Q5JSP0 725 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CNKSR1Q969H4 720 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 GRIP2Q9C0E4 1043 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 LRRC14BA6NHZ5 514 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 RAD51CO43502 376 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 FGFR2P21802 821 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 B3GNT6Q6ZMB0 384 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 DEFB107AQ8IZN7 70 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 SERPINB12Q96P63 405 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 H3BMM5 538 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 VAV1P15498 845 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 NRF1Q16656 503 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 VPS33AQ96AX1 596 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 VPS33BQ9H267 617 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CHST12Q9NRB3 414 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 POTECB2RU33 542 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 ADSLP30566 484 aaPredicted RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 KCNJ1P48048 391 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 ITGA8P53708 1063 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CAMK2GQ13555 558 aaPredicted RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 MTDHQ86UE4 582 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 ANKRD27Q96NW4 1050 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 ZNF432O94892 652 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 S100A2P29034 98 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CYP4F2P78329 520 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 Q4G0T1 1027 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 AGKQ53H12 422 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 TCAIMQ8N3R3 496 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 KCNB2Q92953 911 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 RBM12Q9NTZ6 932 aaKnown RBP13.23□□□□□ -0.29
USP47-202ENST00000339865 PRKAG3Q9UGI9 489 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 LYVE1Q9Y5Y7 322 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 NEDD4P46934 1319 aa13.23□□□□□ -0.29
USP47-202ENST00000339865 PRODHO43272 600 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 KRT36O76013 467 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 NUDT14O95848 222 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 USP17L8P0C7I0 530 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 STAT3P40763 770 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 CCNI2Q6ZMN8 369 aaPredicted RBP13.22□□□□□ -0.29
USP47-202ENST00000339865 EIF3MQ7L2H7 374 aaKnown RBP13.22□□□□□ -0.29
USP47-202ENST00000339865 CHPFQ8IZ52 775 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 LRRC17Q8N6Y2 441 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 TTC29Q8NA56 475 aaPredicted RBP13.22□□□□□ -0.29
USP47-202ENST00000339865 OR7A2PQ8NGA2 310 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 KAT2BQ92831 832 aa13.22□□□□□ -0.29
USP47-202ENST00000339865 ZNF669Q96BR6 464 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms