RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 RNF8O76064 485 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 ABCG1P45844 678 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 PIGHQ14442 188 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 KRT81Q14533 505 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 OR6B2Q6IFH4 312 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 DOCK5Q9H7D0 1870 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 M0QYV0 167 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 ACADSP16219 412 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 TBXAS1P24557 533 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 ZC3H12AQ5D1E8 599 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 FOXB2Q5VYV0 432 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 LPCAT4Q643R3 524 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 ENDOVQ8N8Q3 282 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 MOCOSQ96EN8 888 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 SYNJ2BP-COX16A0A087WUM0 186 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 KCNA2P16389 499 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 CALRP27797 417 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 MSX2P35548 267 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 SNRPFP62306 86 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 RPL10AP62906 217 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 IGBP1P78318 339 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 RALGPS1Q5JS13 557 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 E2F7Q96AV8 911 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 APOPT1Q96IL0 206 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 KRT82Q9NSB4 513 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 COX16Q9P0S2 106 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 B4GALT5O43286 388 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 ERBB2P04626 1255 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 C6orf222P0C671 652 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 NCF2P19878 526 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 RBL1P28749 1068 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 RBBP5Q15291 538 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 TCHHL1Q5QJ38 904 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 VWA5B1Q5TIE3 1220 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 CES3Q6UWW8 571 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 RELL1Q8IUW5 271 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 SCUBE1Q8IWY4 988 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 MPP5Q8N3R9 675 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 NKD2Q969F2 451 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 FOXP3Q9BZS1 431 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 SAR1AQ9NR31 198 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 DRG1Q9Y295 367 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 LRCH1Q9Y2L9 728 aa16.8■□□□□ 0.28
SCARB1-202ENST00000339570 MTO1Q9Y2Z2 717 aaKnown RBP16.8■□□□□ 0.28
SCARB1-202ENST00000339570 WNT10BO00744 389 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 SERPINB6P35237 376 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 PPP2R5DQ14738 602 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 DENND5BQ6ZUT9 1274 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 MTBPQ96DY7 904 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 ADPGKQ9BRR6 497 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 VPS11Q9H270 941 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 USP18Q9UMW8 372 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 CCNG1P51959 295 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-202ENST00000339570 SKA1Q96BD8 255 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 HEXIM2Q96MH2 286 aaKnown RBP16.79■□□□□ 0.28
SCARB1-202ENST00000339570 TUBGCP5Q96RT8 1024 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 NIF3L1Q9GZT8 377 aa16.79■□□□□ 0.28
SCARB1-202ENST00000339570 SPECC1L-ADORA2AF8WAN1 911 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 VWA5AO00534 786 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 TM9SF1O15321 606 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 MCL1Q07820 350 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 CAPSQ13938 189 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 ZRSR2Q15696 482 aaKnown RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 C6orf163Q5TEZ5 329 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 PANX3Q96QZ0 392 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 TIPINQ9BVW5 301 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 MRIQ9BWK5 157 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 MIS12Q9H081 205 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 DDX56Q9NY93 547 aaKnown RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 hCG_2014768A0A024R1R8 64 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 CCDC78A2IDD5 438 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 CCDC160A6NGH7 325 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 LMNAP02545 664 aaKnown RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 HSPA1LP34931 641 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 TGFB2P61812 414 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 CIAPIN1Q6FI81 312 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 PCGF5Q86SE9 256 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 MZB1Q8WU39 189 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 VCPIP1Q96JH7 1222 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 PEBP4Q96S96 227 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 ZNF184Q99676 751 aaPredicted RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 SMYD2Q9NRG4 433 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 NDE1Q9NXR1 346 aa16.78■□□□□ 0.28
SCARB1-202ENST00000339570 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 SNUPNO95149 360 aaKnown RBP16.78■□□□□ 0.28
SCARB1-202ENST00000339570 STBD1O95210 358 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms