RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 CNNM4Q6P4Q7 775 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 ALLCQ8N6M5 410 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 LINC00301Q8NCQ3 95 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 MDGA1Q8NFP4 955 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 DHX58Q96C10 678 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 C7orf25Q9BPX7 421 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 MAGEF1Q9HAY2 307 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 DEC1Q9P2X7 70 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 CHORDC1Q9UHD1 332 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-202ENST00000338995 EVLQ9UI08 416 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-202ENST00000338995 MAP1BP46821 2468 aaKnown RBP15.1■□□□□ 0.01
COMMD4-202ENST00000338995 PTPRJQ12913 1337 aa15.1■□□□□ 0.01
COMMD4-202ENST00000338995 ANAPC1Q9H1A4 1944 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 THADAQ6YHU6 1953 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 EXOC3O60645 756 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 CUTAO60888 179 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
COMMD4-202ENST00000338995 P4HA1P13674 534 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 P2RY2P41231 377 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 ATXN3P54252 364 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-202ENST00000338995 ZNF252P-AS1Q0IIN9 211 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 BIRC3Q13489 604 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 ZNF667Q5HYK9 610 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 TMEM92Q6UXU6 159 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 SLC36A4Q6YBV0 504 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 EPM2AIP1Q7L775 607 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-202ENST00000338995 SYT12Q8IV01 421 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 IL17RCQ8NAC3 791 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 CEP76Q8TAP6 659 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 GOLGA5Q8TBA6 731 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 HPS3Q969F9 1004 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 B3GNT5Q9BYG0 378 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 ZNF518BQ9C0D4 1074 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 MTMR6Q9Y217 621 aa15.09■□□□□ 0.01
COMMD4-202ENST00000338995 EML5Q05BV3 1969 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 SGK1O00141 431 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 CLDN5O00501 218 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 TGFB1I1O43294 461 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 BCKDHBP21953 392 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 HOXD13P35453 343 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 TUBP50607 506 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 MYL6P60660 151 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 GOLGA8FQ08AF8 430 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 GOLGA8DPQ0D2H9 430 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 FOXC1Q12948 553 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 GAB4Q2WGN9 574 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 ANO4Q32M45 955 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 TRIM61Q5EBN2 209 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 LY6G5CQ5SRR4 150 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 EMC10Q5UCC4 262 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 UNC13DQ70J99 1090 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 RABEPKQ7Z6M1 372 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 NELFCDQ8IXH7 590 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 TMEFF1Q8IYR6 380 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 GLIS3Q8NEA6 775 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 HMGB4Q8WW32 186 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 RLN3Q8WXF3 142 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 DNAI2Q9GZS0 605 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 FBXO44Q9H4M3 255 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 DMAP1Q9NPF5 467 aaPredicted RBP15.08■□□□□ 0
COMMD4-202ENST00000338995 FAM13BQ9NYF5 915 aa15.08■□□□□ 0
COMMD4-202ENST00000338995 TFIP11Q9UBB9 837 aaKnown RBP15.08■□□□□ 0
COMMD4-202ENST00000338995 PVALEFA0A1B0GWK0 134 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 TCRBV21S2A2A0A5A6 115 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 CDX4O14627 284 aaPredicted RBP15.07■□□□□ 0
COMMD4-202ENST00000338995 AP5Z1O43299 807 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 COCHO43405 550 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 YEATS4O95619 227 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 HOXD12P35452 270 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 KIR2DL1P43626 348 aaPredicted RBP15.07■□□□□ 0
COMMD4-202ENST00000338995 KDSRQ06136 332 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 E2F4Q16254 413 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 KNOP1Q1ED39 458 aaKnown RBP15.07■□□□□ 0
COMMD4-202ENST00000338995 SNX30Q5VWJ9 437 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 LYSMD4Q5XG99 296 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 C12orf56Q8IXR9 622 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 HDDC3Q8N4P3 179 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 NAT16Q8N8M0 369 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 ZNF516Q92618 1163 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 SMARCD1Q96GM5 515 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 XPO6Q96QU8 1125 aaKnown RBP15.07■□□□□ 0
COMMD4-202ENST00000338995 DUSP9Q99956 384 aaKnown RBP15.07■□□□□ 0
COMMD4-202ENST00000338995 DPEP3Q9H4B8 488 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 VRTNQ9H8Y1 702 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 SPHK2Q9NRA0 654 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 CHD8Q9HCK8 2581 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 GON4LQ3T8J9 2241 aa15.07■□□□□ 0
COMMD4-202ENST00000338995 NUP205Q92621 2012 aa15.06■□□□□ 0
COMMD4-202ENST00000338995 TMEM8BA6NDV4 472 aa15.06■□□□□ 0
COMMD4-202ENST00000338995 PATE3B3GLJ2 98 aa15.06■□□□□ 0
COMMD4-202ENST00000338995 SCAMP3O14828 347 aaKnown RBP15.06■□□□□ 0
COMMD4-202ENST00000338995 GIPC1O14908 333 aa15.06■□□□□ 0
COMMD4-202ENST00000338995 POLR2DO15514 142 aaKnown RBP15.06■□□□□ 0
COMMD4-202ENST00000338995 HOXC11O43248 304 aaPredicted RBP15.06■□□□□ 0
COMMD4-202ENST00000338995 ZNF217O75362 1048 aa15.06■□□□□ 0
COMMD4-202ENST00000338995 RPN1P04843 607 aaKnown RBP15.06■□□□□ 0
COMMD4-202ENST00000338995 DUOXA1Q1HG43 343 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms