RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TRIM11Q96F44 468 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 GORASP1Q9BQQ3 440 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 C16orf70Q9BSU1 422 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 HEMGNQ9BXL5 484 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 CDT1Q9H211 546 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 CISHQ9NSE2 258 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 GPR25O00155 361 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 SMAPO00193 183 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 SURF1Q15526 300 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 P3H1Q32P28 736 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 TTC25Q96NG3 672 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 ABHD16BQ9H3Z7 469 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 PSMG1O95456 288 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 KRT19P08727 400 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 LAMB3Q13751 1172 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 LIN9Q5TKA1 542 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 LVRNQ6Q4G3 990 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 TRIM72Q6ZMU5 477 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 CPB2Q96IY4 423 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 NIF3L1Q9GZT8 377 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 METTL5Q9NRN9 209 aaKnown RBP19.61■□□□□ 0.73
PSPC1-201ENST00000338910 ARL8BQ9NVJ2 186 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 STX18Q9P2W9 335 aaKnown RBP19.61■□□□□ 0.73
PSPC1-201ENST00000338910 NXF1Q9UBU9 619 aaKnown RBP19.61■□□□□ 0.73
PSPC1-201ENST00000338910 TNFSF13BQ9Y275 285 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 A0A1W2PPM1 405 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 MAGEA13PA6NCF6 341 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 H3BRB1 525 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 ADCY6O43306 1168 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 TNNC2P02585 160 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 SLC1A1P43005 524 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 PHKA2P46019 1235 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 AP1B1Q10567 949 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 MAMLD1Q13495 774 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 CCDC142Q17RM4 750 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 ZNF699Q32M78 642 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 DUSP28Q4G0W2 176 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 UBR7Q8N806 425 aa19.61■□□□□ 0.73
PSPC1-201ENST00000338910 TUT1Q9H6E5 874 aaKnown RBP19.61■□□□□ 0.73
PSPC1-201ENST00000338910 RPF1Q9H9Y2 349 aaKnown RBP19.61■□□□□ 0.73
PSPC1-201ENST00000338910 TROVE2P10155 538 aaKnown RBP eCLIP19.6■□□□□ 0.73
PSPC1-201ENST00000338910 ZNF132P52740 706 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 PTP4A2Q12974 167 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 FASTKD3Q14CZ7 662 aaKnown RBP19.6■□□□□ 0.73
PSPC1-201ENST00000338910 RASAL3Q86YV0 1011 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 ZNF276Q8N554 614 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 RFWD2Q8NHY2 731 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 ANKRD36BP1Q96IX9 119 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 MAK16Q9BXY0 300 aaKnown RBP19.6■□□□□ 0.73
PSPC1-201ENST00000338910 PPP1R12CQ9BZL4 782 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 SYNCQ9H7C4 482 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 PCMTD2Q9NV79 361 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 DCTN4Q9UJW0 460 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 SLC15A5A6NIM6 579 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 B4GALT4O60513 344 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 HAUS5O94927 633 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 CUL3Q13618 768 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 RASA2Q15283 850 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 PRAMEF19Q5SWL8 479 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 EPAS1Q99814 870 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 TUBB6Q9BUF5 446 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 FAM192AQ9GZU8 254 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 XYLT2Q9H1B5 865 aa19.6■□□□□ 0.73
PSPC1-201ENST00000338910 PRMT7Q9NVM4 692 aaPredicted RBP19.6■□□□□ 0.73
PSPC1-201ENST00000338910 ZRSR2Q15696 482 aaKnown RBP19.59■□□□□ 0.73
PSPC1-201ENST00000338910 PHF13Q86YI8 300 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-201ENST00000338910 WDR60Q8WVS4 1066 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 SSU72Q9NP77 194 aaKnown RBP19.59■□□□□ 0.73
PSPC1-201ENST00000338910 POLIQ9UNA4 740 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 A0A1B0GVG6 124 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 CFAP69A5D8W1 941 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 GYG2O15488 501 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 STAG3L1P0CL83 205 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 TAF1CQ15572 869 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-201ENST00000338910 SESTD1Q86VW0 696 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 CCNJLQ8IV13 435 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 OR6J1Q8NGC5 347 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 NSL1Q96IY1 281 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 MMADHCQ9H3L0 296 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-201ENST00000338910 KRT82Q9NSB4 513 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 PDP2Q9P2J9 529 aa19.59■□□□□ 0.73
PSPC1-201ENST00000338910 LACTBL1A8MY62 500 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 DNALI1O14645 258 aaPredicted RBP19.58■□□□□ 0.72
PSPC1-201ENST00000338910 MMP3P08254 477 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 NFICP08651 508 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 KBTBD2Q8IY47 623 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 PPFIBP2Q8ND30 876 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 DTX3LQ8TDB6 740 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 TFAP2BQ92481 460 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 EZH1Q92800 747 aaPredicted RBP19.58■□□□□ 0.72
PSPC1-201ENST00000338910 VCPIP1Q96JH7 1222 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 LBHD1Q9BQE6 289 aaPredicted RBP19.58■□□□□ 0.72
PSPC1-201ENST00000338910 NFKBIZQ9BYH8 718 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 PPCSQ9HAB8 311 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 MRPL47Q9HD33 250 aaKnown RBP19.58■□□□□ 0.72
PSPC1-201ENST00000338910 HEY2Q9UBP5 337 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 ZNF212Q9UDV6 495 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 SLC24A2Q9UI40 661 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 USTQ9Y2C2 406 aa19.58■□□□□ 0.72
PSPC1-201ENST00000338910 TLR3O15455 904 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms