RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SMTNL1A8MU46 457 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 MED7O43513 233 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 PDGFBP01127 241 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 MBL2P11226 248 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 SLC9A1P19634 815 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 AOC1P19801 751 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 TUBP50607 506 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 MLLT6P55198 1093 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 SLC7A9P82251 487 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 BST2Q10589 180 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 PDGFRLQ15198 375 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 CNGA2Q16280 664 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 KLHL40Q2TBA0 621 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 SKOR2Q2VWA4 1001 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 FKBP15Q5T1M5 1219 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 SNX30Q5VWJ9 437 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 TPRG1Q6ZUI0 275 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 ARHGAP18Q8N392 663 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 UBR7Q8N806 425 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 RSPRY1Q96DX4 576 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 LRRC4Q9HBW1 653 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 HEBP1Q9NRV9 189 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 GKN1Q9NS71 199 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 GMIPQ9P107 970 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 SIT1Q9Y3P8 196 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 PTPRZ1P23471 2315 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 CACNA1GO43497 2377 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 MYH10P35580 1976 aa11.94□□□□□ -0.5
SLC28A1-202ENST00000338602 HHLA1C9JL84 531 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 O00370 1275 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 SLC9A3R1O14745 358 aaPredicted RBP11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 XPO1O14980 1071 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 RALAP11233 206 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 TCF3P15923 654 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 PON1P27169 355 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 USP8P40818 1118 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 IFNAR2P48551 515 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 KIF11P52732 1056 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 NR1H3Q13133 447 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 MTF1Q14872 753 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 UBXN2BQ14CS0 331 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 ARHGAP44Q17R89 818 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 LCLAT1Q6UWP7 414 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 PIGZQ86VD9 579 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 KIAA1958Q8N8K9 716 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 SH3RF2Q8TEC5 729 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 KAT5Q92993 513 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 CDK5RAP1Q96SZ6 601 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 OSBPL6Q9BZF3 934 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 IRF2BPLQ9H1B7 796 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 FANCLQ9NW38 375 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 CNTN6Q9UQ52 1028 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 CCL26Q9Y258 94 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 PIAS3Q9Y6X2 628 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 NUP210Q8TEM1 1887 aaPredicted RBP11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF318Q5VUA4 2279 aa11.93□□□□□ -0.5
SLC28A1-202ENST00000338602 TLR5O60602 858 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 OAS1P00973 400 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZDHHC11BP0C7U3 371 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 MAGEA9P43362 315 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 PDE4CQ08493 712 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 MIIPQ5JXC2 388 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CDKAL1Q5VV42 579 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 C11orf57Q6ZUT1 292 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CCDC186Q7Z3E2 898 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 RALGPS2Q86X27 583 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 SIX6OS1Q8N1H7 587 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CPA6Q8N4T0 437 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 UBA3Q8TBC4 463 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 OSCP1Q8WVF1 389 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ATP2A3Q93084 1043 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 LRRC3BQ96PB8 259 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 SLC22A12Q96S37 553 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 RNF38Q9H0F5 515 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 DUS2Q9NX74 493 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 TAB2Q9NYJ8 693 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 NAGPAQ9UK23 515 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 DNAJC12Q9UKB3 198 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CPQQ9Y646 472 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 GREB1Q4ZG55 1949 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZNF638Q14966 1978 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 FAM170BA6NMN3 283 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 BECN2A8MW95 431 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 M0QYV0 167 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 RNF225M0QZC1 329 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 LEFTY2O00292 366 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ARNTLO00327 626 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 CYP26A1O43174 497 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 COCHO43405 550 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 NFATC1O95644 943 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 OLFM2O95897 454 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 ZBED1O96006 694 aa11.92□□□□□ -0.5
SLC28A1-202ENST00000338602 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms