RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 LTFP02788 710 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 URODP06132 367 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 MDH1P40925 334 aaKnown RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 MOSPD2Q8NHP6 518 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 PGLYRP2Q96PD5 576 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 SNX13Q9Y5W8 968 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 OTUD4Q01804 1114 aaKnown RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 SRSF11Q05519 484 aaKnown RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 DNAJC3Q13217 504 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CASP10Q92851 521 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 TFR2Q9UP52 801 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 KIF1BO60333 1816 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 SMIM31A0A1B0GVY4 71 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CYB561D2O14569 222 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 MAGEB2O15479 319 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CLUP10909 449 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 TAF6P49848 677 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CTXN3Q4LDR2 81 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 DENND6AQ8IWF6 608 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 MDM1Q8TC05 714 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 RIN2Q8WYP3 895 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 USP7Q93009 1102 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 GOLGA8TH3BQL2 631 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 STAG3L1P0CL83 205 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 FAM45BPQ6NSW5 357 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CDK20Q8IZL9 346 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 RAD21L1Q9H4I0 556 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 PSMD14O00487 310 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CNPP09543 421 aaKnown RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 RBP3P10745 1247 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 PSMC3P17980 439 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 MSH3P20585 1137 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 TERF2Q15554 542 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 ARMCX4Q5H9R4 360 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 GUF1Q8N442 669 aaKnown RBP12.15□□□□□ -0.46
SHANK2-201ENST00000338508 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 GPATCH2LQ9NWQ4 482 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 SHANK2Q9UPX8 1470 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 ANKARQ7Z5J8 1434 aa12.15□□□□□ -0.46
SHANK2-201ENST00000338508 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 CSDE1O75534 798 aaKnown RBP12.15□□□□□ -0.47
SHANK2-201ENST00000338508 ITGA3P26006 1051 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 TALDO1P37837 337 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 OXCT1P55809 520 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 CYLC2Q14093 348 aaPredicted RBP12.15□□□□□ -0.47
SHANK2-201ENST00000338508 STILQ15468 1287 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 CCDC144BQ3MJ40 725 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 DAB2IPQ5VWQ8 1189 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.47
SHANK2-201ENST00000338508 TFAP2DQ7Z6R9 452 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 CBWD2Q8IUF1 395 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 CACTIN-AS1Q8N1I8 211 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 COL26A1Q96A83 441 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 WDR41Q9HAD4 459 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.47
SHANK2-201ENST00000338508 GMFGO60234 142 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SCNN1BP51168 640 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 EPHB3P54753 998 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ARID3BQ8IVW6 561 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 PHF21BQ96EK2 531 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 PIH1D1Q9NWS0 290 aaKnown RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SNTNA6NMZ2 147 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 H7C4K7 107 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 POMCP01189 267 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 RHOCP08134 193 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 CCT8P50990 548 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 PRKAA1Q13131 559 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 MRNIPQ6NTE8 343 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 LINC00523Q86TU6 105 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ANO9A1A5B4 782 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 TRIM49D1C9J1S8 452 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ANXA9O76027 345 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 BAIAP3O94812 1187 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 NDUFB10O96000 172 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ITIH2P19823 946 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 RHOAP61586 193 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 IL5RAQ01344 420 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 CRYMQ14894 314 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 EML3Q32P44 896 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 RSBN1Q5VWQ0 802 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 FEZF2Q8TBJ5 459 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ZKSCAN4Q969J2 545 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 MTO1Q9Y2Z2 717 aaKnown RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 CHRNB3Q05901 458 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 BOP1Q14137 746 aaKnown RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 LRRC74BQ6ZQY2 392 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 UBASH3BQ8TF42 649 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 CEP41Q9BYV8 373 aa12.14□□□□□ -0.47
SHANK2-201ENST00000338508 ILKAPQ9H0C8 392 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-201ENST00000338508 RSAD1Q9HA92 442 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms