RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 E5RJQ4 531 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 DDX3XO00571 662 aaKnown RBP eCLIP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZNF197O14709 1029 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 F11P03951 625 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 UNGP13051 313 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 GJA1P17302 382 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 CDC25CP30307 473 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 EIF4A3P38919 411 aaKnown RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 CCR2P41597 374 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 TFF2Q03403 129 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 CBX2Q14781 532 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 PTPN20Q4JDL3 420 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 PRSS36Q5K4E3 855 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 GAREM2Q75VX8 874 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 TMEM110Q86TL2 294 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 ERICH1Q86X53 443 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 SLC30A5Q8TAD4 765 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 ITFG1Q8TB96 612 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 SHKBP1Q8TBC3 707 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 NDRG1Q92597 394 aaKnown RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 DOCK6Q96HP0 2047 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 NECTIN4Q96NY8 510 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 PANX2Q96RD6 677 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 NOTCH4Q99466 2003 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 CHP1Q99653 195 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 MIS12Q9H081 205 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 ATXN3LQ9H3M9 355 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 POMKQ9H5K3 350 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 SYNCQ9H7C4 482 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 CYLDQ9NQC7 956 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 AVENQ9NQS1 362 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 TRPM5Q9NZQ8 1165 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 GMIPQ9P107 970 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 TJP2Q9UDY2 1190 aa14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 CHORDC1Q9UHD1 332 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 MRPS23Q9Y3D9 190 aaKnown RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZNF638Q14966 1978 aaKnown RBP14.82□□□□□ -0.04
APOBEC3B-202ENST00000335760 MYO16Q9Y6X6 1858 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 FAM92AA1XBS5 289 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 TMCO5BA8MYB1 307 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 NRG2O14511 850 aaPredicted RBP14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 MOSPD3O75425 235 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZBED1O96006 694 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 ABL1P00519 1130 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 ERBB2P04626 1255 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 NSFP46459 744 aaKnown RBP14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 SNX16P57768 344 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 PTCRAQ6ISU1 281 aaPredicted RBP14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 ACAD10Q6JQN1 1059 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 GET4Q7L5D6 327 aaPredicted RBP14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 CCDC186Q7Z3E2 898 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 TMEM150AQ86TG1 271 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 SCUBE3Q8IX30 993 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 MSANTD4Q8NCY6 345 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 PDZD8Q8NEN9 1154 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 IPO4Q8TEX9 1081 aaKnown RBP14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 CLEC4CQ8WTT0 213 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 ING5Q8WYH8 240 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 OVCA2Q8WZ82 227 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 DEF6Q9H4E7 631 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 CNGB3Q9NQW8 809 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 TAS2R14Q9NYV8 317 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 THEGQ9P2T0 379 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 ADAMTS1Q9UHI8 967 aa14.81□□□□□ -0.04
APOBEC3B-202ENST00000335760 SSU72P8A0A1W2PR75 194 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 TADA3O75528 432 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 FBXO21O94952 628 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 PPP3CCP48454 512 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 GSDMDP57764 484 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 DAOAP59103 153 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 CYP4F8P98187 520 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 CDK17Q00537 523 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 CENPCQ03188 943 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 TEAD2Q15562 447 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 PM20D1Q6GTS8 502 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 OR6B2Q6IFH4 312 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 MMS22LQ6ZRQ5 1243 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 SCML4Q8N228 414 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 MRPS31Q92665 395 aaKnown RBP14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 C18orf8Q96DM3 657 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 CCDC42Q96M95 316 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 C11orf70Q9BRQ4 267 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 NHEJ1Q9H9Q4 299 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 TLR8Q9NR97 1041 aaKnown RBP14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 BRWD1Q9NSI6 2320 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 XIRP2A4UGR9 3374 aa14.8□□□□□ -0.04
APOBEC3B-202ENST00000335760 A0A087X0T9 212 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 A0A1W2PQH9 124 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZNF840PA6NDX5 716 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 PAPSS1O43252 624 aaPredicted RBP14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 AKR1B10O60218 316 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 ZDHHC11BP0C7U3 371 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 FAM228BP0C875 321 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 CEBPBP17676 345 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 MMP8P22894 467 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 GABRB2P47870 512 aa14.79□□□□□ -0.04
APOBEC3B-202ENST00000335760 PGFP49763 221 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms