RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SPATA17Q96L03 361 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 GUCD1Q96NT3 240 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 IRX2Q9BZI1 471 aaPredicted RBP22.62■■□□□ 1.21
TPM1-204ENST00000334895 TRIM7Q9C029 511 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 CTTNBP2NLQ9P2B4 639 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 WDR35Q9P2L0 1181 aa22.62■■□□□ 1.21
TPM1-204ENST00000334895 PRRC2BQ5JSZ5 2229 aaKnown RBP22.62■■□□□ 1.21
TPM1-204ENST00000334895 MTCL1Q9Y4B5 1905 aaKnown RBP22.62■■□□□ 1.21
TPM1-204ENST00000334895 BUB1O43683 1085 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 GLUD1P00367 558 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 RPL10AP62906 217 aaKnown RBP22.61■■□□□ 1.21
TPM1-204ENST00000334895 SLC6A3Q01959 620 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 TAF5Q15542 800 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 DNAJC24Q6P3W2 148 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 GIPC2Q8TF65 315 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 CNGB3Q9NQW8 809 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 PARVAQ9NVD7 372 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 MTMR10Q9NXD2 777 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 INSL5Q9Y5Q6 135 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 ZNF638Q14966 1978 aaKnown RBP22.61■■□□□ 1.21
TPM1-204ENST00000334895 MYO16Q9Y6X6 1858 aa22.61■■□□□ 1.21
TPM1-204ENST00000334895 PRRG1O14668 218 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 PER2O15055 1255 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 MTA2O94776 668 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 USP17L7P0C7H9 530 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 SNX16P57768 344 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 DAOAP59103 153 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 RPL7AP62424 266 aaKnown RBP22.6■■□□□ 1.21
TPM1-204ENST00000334895 MTMR3Q13615 1198 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 FAM102AQ5T9C2 384 aaPredicted RBP22.6■■□□□ 1.21
TPM1-204ENST00000334895 ZDHHC17Q8IUH5 632 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 RHOT2Q8IXI1 618 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 NUP93Q8N1F7 819 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 KREMEN2Q8NCW0 462 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 SLC22A17Q8WUG5 538 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 METTL5Q9NRN9 209 aaKnown RBP22.6■■□□□ 1.21
TPM1-204ENST00000334895 IL37Q9NZH6 218 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 UVRAGQ9P2Y5 699 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 GOLGA6L9A6NEM1 432 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 SIGLEC16A6NMB1 481 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 ZBED1O96006 694 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 ELF1P32519 619 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 MRPS5P82675 430 aaKnown RBP22.6■■□□□ 1.21
TPM1-204ENST00000334895 PM20D1Q6GTS8 502 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 JOSD2Q8TAC2 188 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 SLC7A14Q8TBB6 771 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 ZNF564Q8TBZ8 553 aaPredicted RBP22.6■■□□□ 1.21
TPM1-204ENST00000334895 CDX2Q99626 313 aaPredicted RBP22.6■■□□□ 1.21
TPM1-204ENST00000334895 TMEM59LQ9UK28 342 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 CAPN6Q9Y6Q1 641 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 SCINQ9Y6U3 715 aa22.6■■□□□ 1.21
TPM1-204ENST00000334895 EYSQ5T1H1 3165 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 FBXO21O94952 628 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 MOCS3O95396 460 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 EPCAMP16422 314 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 HADHBP55084 474 aaKnown RBP22.59■■□□□ 1.21
TPM1-204ENST00000334895 TWF1Q12792 350 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 IFRD2Q12894 506 aaPredicted RBP22.59■■□□□ 1.21
TPM1-204ENST00000334895 TRNP1Q6NT89 227 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 DENND5BQ6ZUT9 1274 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 HFE2Q6ZVN8 426 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 SLC26A9Q7LBE3 791 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 RBM23Q86U06 439 aaKnown RBP22.59■■□□□ 1.21
TPM1-204ENST00000334895 SCML4Q8N228 414 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 MYLIPQ8WY64 445 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 MRPL38Q96DV4 380 aaKnown RBP22.59■■□□□ 1.21
TPM1-204ENST00000334895 MCEEQ96PE7 176 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 SELENOOQ9BVL4 669 aa22.59■■□□□ 1.21
TPM1-204ENST00000334895 MRPL47Q9HD33 250 aaKnown RBP22.59■■□□□ 1.21
TPM1-204ENST00000334895 FAM92AA1XBS5 289 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 TMEM191CA6NGB0 347 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 SLC38A8A6NNN8 435 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 YJEFN3A6XGL0 299 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 ESPNB1AK53 854 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 E7ENQ6 273 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 GRAP2O75791 330 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 C1RP00736 705 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 KRT3P12035 628 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 MSNP26038 577 aaKnown RBP22.58■■□□□ 1.21
TPM1-204ENST00000334895 RFC1P35251 1148 aaPredicted RBP22.58■■□□□ 1.21
TPM1-204ENST00000334895 SCNN1AP37088 669 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 NOP2P46087 812 aaKnown RBP22.58■■□□□ 1.21
TPM1-204ENST00000334895 RNF10Q8N5U6 811 aaKnown RBP22.58■■□□□ 1.21
TPM1-204ENST00000334895 TPCN2Q8NHX9 752 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 FEZF2Q8TBJ5 459 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 BTBD6Q96KE9 485 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 CEP295NLQ96MC4 621 aa22.58■■□□□ 1.21
TPM1-204ENST00000334895 C8AP07357 584 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 ALDH1A3P47895 512 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 PGFP49763 221 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 OGDHQ02218 1023 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 ADGRE1Q14246 886 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 DUSP6Q16828 381 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 EMC1Q8N766 993 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 HMGA1P17096 107 aaKnown RBP22.57■■□□□ 1.2
TPM1-204ENST00000334895 FLT3P36888 993 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 ZNF252P-AS1Q0IIN9 211 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 PTPROQ16827 1216 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 TTLL2Q9BWV7 592 aa22.57■■□□□ 1.2
TPM1-204ENST00000334895 MAN1C1Q9NR34 630 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms