RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TTC39CQ8N584 583 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 KLF6Q99612 283 aaPredicted RBP18.48■□□□□ 0.55
LRCH3-201ENST00000334859 TRIM33Q9UPN9 1127 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 SNX9Q9Y5X1 595 aa18.48■□□□□ 0.55
LRCH3-201ENST00000334859 H3BRB1 525 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 PFKMP08237 780 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 ADRA1DP25100 572 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 YWHAGP61981 247 aaKnown RBP eCLIP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 SETDB1Q15047 1291 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 IGDCC3Q8IVU1 814 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 MAP7D3Q8IWC1 876 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 FAF2Q96CS3 445 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 TUT1Q9H6E5 874 aaKnown RBP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 VTA1Q9NP79 307 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 KIAA1257Q9ULG3 409 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 IKBKGQ9Y6K9 419 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 COL1A2P08123 1366 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 A0A1B0GUA9 196 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 KCNN4O15554 427 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 EDF1O60869 148 aaKnown RBP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 MAP3K6O95382 1288 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 IBSPP21815 317 aaPredicted RBP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 E2F5Q15329 346 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 CCDC14Q49A88 953 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 ZC3H12AQ5D1E8 599 aaKnown RBP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 PPP1R26Q5T8A7 1209 aaPredicted RBP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 PMF1Q6P1K2 205 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 ANKLE1Q8NAG6 615 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 FAM172AQ8WUF8 416 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 DCAKDQ8WVC6 231 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 RNF157Q96PX1 679 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 CYTH2Q99418 400 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 C16orf70Q9BSU1 422 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 DHRS4Q9BTZ2 278 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 GBA2Q9HCG7 927 aaPredicted RBP18.47■□□□□ 0.55
LRCH3-201ENST00000334859 RAB6BQ9NRW1 208 aa18.47■□□□□ 0.55
LRCH3-201ENST00000334859 PLXNA1Q9UIW2 1896 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 WDR91A4D1P6 747 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 KBTBD13C9JR72 458 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 ENDOD1O94919 500 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 NPTXRO95502 500 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 SDC4P31431 198 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 SLC8A1P32418 973 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 GRIK4Q16099 956 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 KIZQ2M2Z5 673 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 MAMDC4Q6UXC1 1216 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 GPRC5AQ8NFJ5 357 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 ERP27Q96DN0 273 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 TBC1D31Q96DN5 1066 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 MRPL45Q9BRJ2 306 aaKnown RBP18.46■□□□□ 0.55
LRCH3-201ENST00000334859 SSU72Q9NP77 194 aaKnown RBP18.46■□□□□ 0.55
LRCH3-201ENST00000334859 STK38LQ9Y2H1 464 aa18.46■□□□□ 0.55
LRCH3-201ENST00000334859 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.46■□□□□ 0.54
LRCH3-201ENST00000334859 TCRBV9S1A1TA0A576 114 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 AVILO75366 819 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 STAU1O95793 577 aaKnown RBP18.46■□□□□ 0.54
LRCH3-201ENST00000334859 GJA5P36382 358 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 GCLCP48506 637 aaPredicted RBP18.46■□□□□ 0.54
LRCH3-201ENST00000334859 BCAR1P56945 870 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 CCNA1P78396 465 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 CCDC15Q0P6D6 951 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 TMEM62Q0P6H9 643 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 KCNJ11Q14654 390 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 STILQ15468 1287 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 OLFML1Q6UWY5 402 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 TTC30AQ86WT1 665 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 VSIG1Q86XK7 387 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 SCUBE3Q8IX30 993 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 MYLK2Q9H1R3 596 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 CXCL16Q9H2A7 254 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 USH1CQ9Y6N9 552 aa18.46■□□□□ 0.54
LRCH3-201ENST00000334859 APOL1O14791 398 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 PPEF2O14830 753 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 ZBED1O96006 694 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 KRT16P08779 473 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 FGFR1P11362 822 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 GRM5P41594 1212 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 YARSP54577 528 aaKnown RBP18.45■□□□□ 0.54
LRCH3-201ENST00000334859 PTK7Q13308 1070 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 ZNF792Q3KQV3 632 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 PPP6R3Q5H9R7 873 aaPredicted RBP18.45■□□□□ 0.54
LRCH3-201ENST00000334859 NT5DC4Q86YG4 428 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 PLD5Q8N7P1 536 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 TCP10LQ8TDR4 215 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 ZNF75CPQ92670 426 aaPredicted RBP18.45■□□□□ 0.54
LRCH3-201ENST00000334859 CFAP36Q96G28 342 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 LRRC37BQ96QE4 947 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 C12orf65Q9H3J6 166 aaKnown RBP18.45■□□□□ 0.54
LRCH3-201ENST00000334859 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
LRCH3-201ENST00000334859 HESX1Q9UBX0 185 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 TRIP11Q15643 1979 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 SCN1AP35498 2009 aa18.45■□□□□ 0.54
LRCH3-201ENST00000334859 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.44■□□□□ 0.54
LRCH3-201ENST00000334859 INHBAP08476 426 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 TSHRP16473 764 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 DESP17661 470 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 ALDH3A1P30838 453 aa18.44■□□□□ 0.54
LRCH3-201ENST00000334859 PDK2Q15119 407 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms