RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PRKAA2P54646 552 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 GET4Q7L5D6 327 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 KCNK4Q9NYG8 393 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 GNPTGQ9UJJ9 305 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ADGRL2O95490 1459 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ATP7BP35670 1465 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 AGRPO00253 132 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 NFICP08651 508 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 LRRC24Q50LG9 513 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 OTOAQ7RTW8 1153 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 GUF1Q8N442 669 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 DBNDD2Q9BQY9 259 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CINPQ9BW66 212 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 NUAK2Q9H093 628 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 MKLN1Q9UL63 735 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 VPS4AQ9UN37 437 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 TSPAN4O14817 238 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CCNKO75909 580 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 KCNK10P57789 538 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 UBXN2AP68543 259 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CERKLQ49MI3 558 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 SUCLG2Q96I99 432 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CEP170P1Q96L14 293 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF446Q9NWS9 450 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 DLG5Q8TDM6 1919 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ASMTLO95671 621 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 GYPCP04921 128 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF806P0C7X5 589 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CCND2P30279 289 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 OLFML2AQ68BL7 652 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 PMF1Q6P1K2 205 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 TTC39CQ8N584 583 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF222Q9UK12 451 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 PNMA8BQ9ULN7 279 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CEP170Q5SW79 1584 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 PRCPP42785 496 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 IREB2P48200 963 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CLCN2P51788 898 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 HK2P52789 917 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 NAA20P61599 178 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 MTERF2Q49AM1 385 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 FBXO42Q6P3S6 717 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CDKL3Q8IVW4 592 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 RDM1Q8NG50 284 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 SDR42E1Q8WUS8 393 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 DARSP14868 501 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 NPEPPSP55786 919 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ERMARDQ5T6L9 678 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 PHACTR1Q9C0D0 580 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 ARHGEF38Q9NXL2 777 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CNOT8Q9UFF9 292 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 RTTNQ86VV8 2226 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 PVALEFA0A1B0GWK0 134 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 SMCO3A2RU48 225 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 SRP54P61011 504 aaKnown RBP10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 HSF2Q03933 536 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 DPP9Q86TI2 863 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 STK33Q9BYT3 514 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 EMILIN3Q9NT22 766 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 NMRK1Q9NWW6 199 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 COQ6Q9Y2Z9 468 aa10.66□□□□□ -0.7
SPTBN1-201ENST00000333896 CD3EAPO15446 510 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 KCNN4O15554 427 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 FAM228BP0C875 321 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 UQCRBP14927 111 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 ARL4DP49703 201 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 NECTIN1Q15223 517 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 ANKS1AQ92625 1134 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CCSER1Q9C0I3 900 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 STOX2Q9P2F5 926 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 SSTR3P32745 418 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 GRIK1P39086 918 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CDK7P50613 346 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 LACTB2Q53H82 288 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 LMBRD2Q68DH5 695 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 PEG10Q86TG7 708 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 POMGNT2Q8NAT1 580 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CDH19Q9H159 772 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 COMMD9Q9P000 198 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 AKAP7Q9P0M2 348 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 SPASTQ9UBP0 616 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 FGAP02671 866 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CLUP10909 449 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 PRIM2P49643 509 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 SAMD4BQ5PRF9 694 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 TRAPPC3LQ5T215 181 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 CENPLQ8N0S6 344 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 EID3Q8N140 333 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 PTPRN2Q92932 1015 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 ADAM33Q9BZ11 813 aa10.65□□□□□ -0.7
SPTBN1-201ENST00000333896 SLC9A2Q9UBY0 812 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms