RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 IGKV6D-21A0A0A0MT36 114 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 IRF6O14896 467 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 MCF2LO15068 1137 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 MAFO75444 373 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 KRT36O76013 467 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 TOP3BO95985 862 aaKnown RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 NFICP08651 508 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 ICAM3P32942 547 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 ETV4P43268 484 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 CDH6P55285 790 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 YWHAEP62258 255 aaKnown RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 TAP1Q03518 808 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 BLMHQ13867 455 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 BMPR2Q13873 1038 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 KPNB1Q14974 876 aaKnown RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 RASA2Q15283 850 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 FBXO27Q8NI29 283 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 WDR60Q8WVS4 1066 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 TRIM55Q9BYV6 548 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 KCNG1Q9UIX4 513 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 INO80B-WBP1J3KQ70 363 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 CYB561D2O14569 222 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 APOC2P02655 101 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 MYL2P10916 166 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 YY1P25490 414 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 ABCD1P33897 745 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 PCK1P35558 622 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 FAM102AQ5T9C2 384 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 PTCD3Q96EY7 689 aaKnown RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 CYTH2Q99418 400 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-201ENST00000333371 VPS11Q9H270 941 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 BATF3Q9NR55 127 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 STRIP2Q9ULQ0 834 aa12.85□□□□□ -0.35
VPS33B-201ENST00000333371 H7C0C1 242 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 M0QYV0 167 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 TRAFD1O14545 582 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 TM9SF1O15321 606 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 MICAL2O94851 1124 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 INHBAP08476 426 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 DLDP09622 509 aaKnown RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ATP5OP48047 213 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 RASSF2P50749 326 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 NEK3P51956 506 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 TAZQ16635 292 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ACSBG2Q5FVE4 666 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 CAPRIN2Q6IMN6 1127 aaKnown RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SLC4A11Q8NBS3 891 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 FAF2Q96CS3 445 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SLC13A1Q9BZW2 595 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 RAB6BQ9NRW1 208 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 LRRC42Q9Y546 428 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 HEY1Q9Y5J3 304 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 IKBKGQ9Y6K9 419 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 GSC2O15499 205 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 MAP3K13O43283 966 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ARIH2O95376 493 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 KITP10721 976 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ROR1Q01973 937 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 PRKD1Q15139 912 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 RCN1Q15293 331 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SMAD1Q15797 465 aaKnown RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 HSDL1Q3SXM5 330 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ERO1BQ86YB8 467 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 CMASQ8NFW8 434 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-201ENST00000333371 NRG4Q8WWG1 115 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SLC44A1Q8WWI5 657 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 SKA1Q96BD8 255 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 CLMNQ96JQ2 1002 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 NMUR2Q9GZQ4 415 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 DNAH12Q6ZR08 3092 aa12.84□□□□□ -0.35
VPS33B-201ENST00000333371 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 F5H423 210 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 GYG2O15488 501 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 ITGB3P05106 788 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 RFC5P40937 340 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms