RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ADCY6O43306 1168 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 UBOX5O94941 541 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 RNASELQ05823 741 aaKnown RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 TMEM62Q0P6H9 643 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 KRT81Q14533 505 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 ZBTB6Q15916 424 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 BBS9Q3SYG4 887 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 FAM133BQ5BKY9 247 aaKnown RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 SLC27A1Q6PCB7 646 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 C3orf62Q6ZUJ4 267 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 TMEM110Q86TL2 294 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 BRI3BPQ8WY22 251 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 PAIP2Q9BPZ3 127 aaKnown RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 DHRS4Q9BTZ2 278 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 ACSS3Q9H6R3 686 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 FAM49BQ9NUQ9 324 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GGT7Q9UJ14 662 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 TYROBPO43914 113 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GPR32O75388 356 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GABBR2O75899 941 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 IL4RP24394 825 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 RPA3P35244 121 aaPredicted RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 SLC6A3Q01959 620 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 MTM1Q13496 603 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 ACVR2BQ13705 512 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 SPARCL1Q14515 664 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 KCNJ11Q14654 390 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 PDK2Q15119 407 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 ZC3H12AQ5D1E8 599 aaKnown RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 ADGRD1Q6QNK2 874 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 CATSPER4Q7RTX7 472 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 PDIK1LQ8N165 341 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 FBF1Q8TES7 1133 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 FAM172AQ8WUF8 416 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 SLC35F5Q8WV83 523 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 TEKT4Q8WW24 435 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 USP6NLQ92738 828 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 C18orf25Q96B23 403 aaPredicted RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 FAM49AQ9H0Q0 323 aaPredicted RBP15.2■□□□□ 0.02
TPM3-206ENST00000330188 CDHR5Q9HBB8 845 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GPATCH2LQ9NWQ4 482 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GRID1Q9ULK0 1009 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
TPM3-206ENST00000330188 RRN3P2A6NIE6 340 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 H7C0C1 242 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 TSHRP16473 764 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 ATP5OP48047 213 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 GTF2A2P52657 109 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 KLHL38Q2WGJ6 581 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 BOLA3Q53S33 107 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 CYB5D1Q6P9G0 228 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 LRRC52Q8N7C0 313 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PLD5Q8N7P1 536 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 BEST2Q8NFU1 509 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 GRAMD1AQ96CP6 724 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PAFAH2Q99487 392 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 TINF2Q9BSI4 451 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 GCOM2Q9BZD3 368 aaPredicted RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 ABHD16BQ9H3Z7 469 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 ZNF408Q9H9D4 720 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 USP29Q9HBJ7 922 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PCDH18Q9HCL0 1135 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 NGRNQ9NPE2 291 aaKnown RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 HES2Q9Y543 173 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SCN4AP35499 1836 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PAPSS1O43252 624 aaPredicted RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 PIAS1O75925 651 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 CA4P22748 312 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SDC4P31431 198 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 MGAT5Q09328 741 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SLC1A5Q15758 541 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 GLRA4Q5JXX5 417 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 IQSEC1Q6DN90 963 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SCYL2Q6P3W7 929 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 RGS9BPQ6ZS82 235 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 FAM47EQ6ZV65 393 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 ANKRD23Q86SG2 305 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 MAP7D3Q8IWC1 876 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SCUBE3Q8IX30 993 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PALM2Q8IXS6 379 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 PQLC3Q8N755 202 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 MZB1Q8WU39 189 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SNRNP25Q9BV90 132 aaKnown RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 PITPNM3Q9BZ71 974 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 SSU72Q9NP77 194 aaKnown RBP15.19■□□□□ 0.02
TPM3-206ENST00000330188 GJD2Q9UKL4 321 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 CHMP2BQ9UQN3 213 aa15.19■□□□□ 0.02
TPM3-206ENST00000330188 TGM2P21980 687 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
TPM3-206ENST00000330188 PDK4Q16654 411 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms