RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 YIPF1Q9Y548 306 aa17.36■□□□□ 0.37
PDLIM1-201ENST00000329399 EFCAB8A8MWE9 144 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 MOSPD3O75425 235 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 MTA2O94776 668 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 CLSTN1O94985 981 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 FSHRP23945 695 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 GNA15P30679 374 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 NOP2P46087 812 aaKnown RBP17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 GPR15P49685 360 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 PSMC1P62191 440 aaKnown RBP17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 AMPD2Q01433 879 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 CLEC16AQ2KHT3 1053 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 ZDHHC14Q8IZN3 488 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 TMEM86AQ8N2M4 240 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 TDRD5Q8NAT2 981 aaKnown RBP17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 SLC20A1Q8WUM9 679 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 ACBD6Q9BR61 282 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 CORO1BQ9BR76 489 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 RPP25Q9BUL9 199 aaKnown RBP17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 LRRC3Q9BY71 257 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 OXCT2Q9BYC2 517 aaPredicted RBP17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 PDCL3Q9H2J4 239 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 SMYD3Q9H7B4 428 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 CRTAC1Q9NQ79 661 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 ZDBF2Q9HCK1 2354 aa17.35■□□□□ 0.37
PDLIM1-201ENST00000329399 FANCGO15287 622 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 DCXO43602 365 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 XYLBO75191 536 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 LRG1P02750 347 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 CYP1A1P04798 512 aaPredicted RBP17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 POU2F2P09086 479 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 GJA1P17302 382 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 ATF6P18850 670 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 GBP2P32456 591 aaPredicted RBP17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 ASPAP45381 313 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 TNNC1P63316 161 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 PABPC1LQ4VXU2 614 aaKnown RBP17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 SDHAF4Q5VUM1 108 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 OTOP3Q7RTS5 596 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 SLFN11Q7Z7L1 901 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 FGF13Q92913 245 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 DPEP3Q9H4B8 488 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 AVENQ9NQS1 362 aaPredicted RBP17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 ABI2Q9NYB9 513 aaPredicted RBP17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 SNX12Q9UMY4 172 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 PCDHGC3Q9UN70 934 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 HYOU1Q9Y4L1 999 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 CEP83Q9Y592 693 aa17.34■□□□□ 0.37
PDLIM1-201ENST00000329399 MMEP08473 750 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 UNGP13051 313 aaPredicted RBP17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 LAMP2P13473 410 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 CEBPBP17676 345 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 PTPN2P17706 415 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 WARSP23381 471 aaKnown RBP17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 CYP2F1P24903 491 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 CENPCQ03188 943 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 STILQ15468 1287 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 INTS6LQ5JSJ4 861 aaKnown RBP17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 PRSS36Q5K4E3 855 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 FAM171BQ6P995 826 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 SCARA5Q6ZMJ2 495 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 RTL10Q7L3V2 364 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 DPH6Q7L8W6 267 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 TPCN2Q8NHX9 752 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 ARID3AQ99856 593 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 PACSIN1Q9BY11 444 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 KCNK12Q9HB15 430 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 ZNF334Q9HCZ1 680 aaPredicted RBP17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 TFR2Q9UP52 801 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 CAPN6Q9Y6Q1 641 aa17.33■□□□□ 0.37
PDLIM1-201ENST00000329399 CYP1A2P05177 515 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 HAPLN1P10915 354 aaPredicted RBP17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 GNL1P36915 607 aaPredicted RBP17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 NSFP46459 744 aaKnown RBP17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 LHX1P48742 406 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 INCA1Q0VD86 236 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 MEI1Q5TIA1 1274 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 PHF13Q86YI8 300 aaPredicted RBP17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 GPIHBP1Q8IV16 184 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 NPAS3Q8IXF0 933 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 SLC35G2Q8TBE7 412 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 GIPC2Q8TF65 315 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 ZNF606Q8WXB4 792 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 ZSWIM3Q96MP5 696 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 PCDHB18PQ96TA0 734 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 SEPT5Q99719 369 aaPredicted RBP17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 EPS15L1Q9UBC2 864 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 SALL4Q9UJQ4 1053 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
PDLIM1-201ENST00000329399 PALMO75781 387 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 ZXDAP98168 799 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 ORC1Q13415 861 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 DDR2Q16832 855 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MGAT5BQ3V5L5 792 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 TAF3Q5VWG9 929 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 C11orf63Q6NUN7 778 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 PARM1Q6UWI2 310 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 DNAJB7Q7Z6W7 309 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms