RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SLC35B2Q8TB61 432 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 EXOC4Q96A65 974 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 CALN1Q9BXU9 219 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 RGS18Q9NS28 235 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.63■□□□□ 0.09
TPM3-205ENST00000328159 GOLGA6AQ9NYA3 693 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 PHF24Q9UPV7 400 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 ARVCFO00192 962 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 TP73O15350 636 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 ITGAVP06756 1048 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 VPS41P49754 854 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 ARSEP51690 589 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 ITGA8P53708 1063 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CDH6P55285 790 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CAV1Q03135 178 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 TUSC3Q13454 348 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 SLMAPQ14BN4 828 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 BOLA3Q53S33 107 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 EFHC1Q5JVL4 640 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CLEC20AQ6ZU45 233 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 BBOF1Q8ND07 529 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 OR2W6PQ8NHA6 318 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CCHCR1Q8TD31 782 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 TEKT4Q8WW24 435 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 KCTD13Q8WZ19 329 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 UROC1Q96N76 676 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 TBCBQ99426 244 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 C11orf84Q9BUA3 381 aaPredicted RBP15.62■□□□□ 0.09
TPM3-205ENST00000328159 ANAPC5Q9UJX4 755 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CDH9Q9ULB4 789 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 INPPL1O15357 1258 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 BEST1O76090 585 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 FAM200BP0CF97 657 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 ODC1P11926 461 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 PAX3P23760 479 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 HDAC4P56524 1084 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 OTUD4Q01804 1114 aaKnown RBP15.62■□□□□ 0.09
TPM3-205ENST00000328159 ZNF844Q08AG5 666 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 ADIGQ0VDE8 80 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CD300LGQ6UXG3 332 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 PRUNE1Q86TP1 453 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 RTN4RL1Q86UN2 441 aaPredicted RBP15.62■□□□□ 0.09
TPM3-205ENST00000328159 FAM76AQ8TAV0 307 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 SPATA18Q8TC71 538 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 ACTL9Q8TC94 416 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 CENPIQ92674 756 aaPredicted RBP15.62■□□□□ 0.09
TPM3-205ENST00000328159 DDX23Q9BUQ8 820 aaKnown RBP15.62■□□□□ 0.09
TPM3-205ENST00000328159 EPB41L4BQ9H329 900 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 PABPC3Q9H361 631 aaKnown RBP15.62■□□□□ 0.09
TPM3-205ENST00000328159 KRT82Q9NSB4 513 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
TPM3-205ENST00000328159 PCNTO95613 3336 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 MYBPHLA2RUH7 354 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 C9IYK1 514 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 KBTBD13C9JR72 458 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 I3L4J1 428 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 B3GAT3O94766 335 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 RARGP13631 454 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 TFE3P19532 575 aaPredicted RBP15.61■□□□□ 0.09
TPM3-205ENST00000328159 PCSK1P29120 753 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 BRCC3P46736 316 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 DPYSL3Q14195 570 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 KRT81Q14533 505 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 PDK2Q15119 407 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 IZUMO3Q5VZ72 239 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 FAM35AQ86V20 835 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 METTL23Q86XA0 190 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 MAP7D3Q8IWC1 876 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 MAK16Q9BXY0 300 aaKnown RBP15.61■□□□□ 0.09
TPM3-205ENST00000328159 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.61■□□□□ 0.09
TPM3-205ENST00000328159 LRRC4Q9HBW1 653 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 TMBIM4Q9HC24 238 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
TPM3-205ENST00000328159 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.61■□□□□ 0.09
TPM3-205ENST00000328159 SAE1Q9UBE0 346 aaPredicted RBP15.61■□□□□ 0.09
TPM3-205ENST00000328159 GOLGA6L10A6NI86 522 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 APOC4-APOC2K7ER74 178 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 EOMESO95936 686 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 APOC2P02655 101 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 CYP11A1P05108 521 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 EIF3BP55884 814 aaKnown RBP15.6■□□□□ 0.09
TPM3-205ENST00000328159 MAP3K7CLP57077 242 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 MRPS5P82675 430 aaKnown RBP15.6■□□□□ 0.09
TPM3-205ENST00000328159 ADCY1Q08828 1119 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 MMRN1Q13201 1228 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 TFDP2Q14188 446 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 PAN2Q504Q3 1202 aaKnown RBP15.6■□□□□ 0.09
TPM3-205ENST00000328159 ZC3H12AQ5D1E8 599 aaKnown RBP15.6■□□□□ 0.09
TPM3-205ENST00000328159 SLC24A5Q71RS6 500 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 CCDC25Q86WR0 208 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 MYCBPAPQ8TBZ2 947 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 LINC01599Q8WXQ3 324 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 PCED1BQ96HM7 432 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 RTP3Q9BQQ7 232 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 SNRNP25Q9BV90 132 aaKnown RBP15.6■□□□□ 0.09
TPM3-205ENST00000328159 SEMA4AQ9H3S1 761 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 PSD3Q9NYI0 1048 aa15.6■□□□□ 0.09
TPM3-205ENST00000328159 M0QZQ0 153 aa15.59■□□□□ 0.09
TPM3-205ENST00000328159 MDM4O15151 490 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms