RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RBBP8NLQ8NC74 664 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 INPP5DQ92835 1189 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 C6orf62Q9GZU0 229 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PCDH18Q9HCL0 1135 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 USP17L10C9JJH3 530 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 TCF4P15884 667 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 LBRQ14739 615 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 P3H2Q8IVL5 708 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 MYCBPAPQ8TBZ2 947 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 AFDNP55196 1824 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 BCORL1Q5H9F3 1711 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PRKAR1AP10644 381 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PNPLA4P41247 253 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 RBBP7Q16576 425 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 SWI5Q1ZZU3 235 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 TRABDQ9H4I3 376 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 LSM7Q9UK45 103 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 AGO2Q9UKV8 859 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 SRP54P61011 504 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 SSX2Q16385 188 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ZBTB33Q86T24 672 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 GANCQ8TET4 914 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 BORCS5Q969J3 196 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 CCT8L2Q96SF2 557 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 CYTH4Q9UIA0 394 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 DTNAQ9Y4J8 743 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 CPDO75976 1380 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 DPYSL4O14531 572 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PCSK1P29120 753 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ARSEP51690 589 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 AP3S2P59780 193 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 NR1D2Q14995 579 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 UTS2BQ765I0 119 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 SZRD1Q7Z422 152 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 POLR1BQ9H9Y6 1135 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 GRID1Q9ULK0 1009 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 SNX24Q9Y343 169 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 CACNA2D1P54289 1103 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 RALGDSQ12967 914 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 MFSD14CQ5VZR4 134 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF544Q6NX49 715 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 EIF3MQ7L2H7 374 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 CDC26Q8NHZ8 85 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 JADE3Q92613 823 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 MCAMP43121 646 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 RASGRP4Q8TDF6 673 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PLA2G12BQ9BX93 195 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PAIP1Q9H074 479 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 MTIF3Q9H2K0 278 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ABT1Q9ULW3 272 aaKnown RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 C1orf232A0A0U1RR37 186 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 CDH6P55285 790 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 GFPT1Q06210 699 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF786Q8N393 782 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 C12orf66Q96MD2 445 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 AKAP7Q9P0M2 348 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-201ENST00000322507 EDARQ9UNE0 448 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ALKQ9UM73 1620 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 H7C2Y5 167 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 RPS6KA3P51812 740 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-201ENST00000322507 ATPAF2Q8N5M1 289 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 PCDHGA11Q9Y5H2 935 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 TMEM94Q12767 1356 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 UQCRBP14927 111 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 TRMT5Q32P41 509 aaKnown RBP10.02□□□□□ -0.8
COL12A1-201ENST00000322507 UBXN11Q5T124 520 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 BTBD8Q5XKL5 378 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 STRA8Q7Z7C7 330 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 OR6P1Q8NGX9 317 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-201ENST00000322507 FARP2O94887 1054 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF846Q147U1 533 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 TRIP13Q15645 432 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-201ENST00000322507 SLC9A4Q6AI14 798 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 DEF8Q6ZN54 512 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 LHFPL3Q86UP9 236 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 CCNYL1Q8N7R7 359 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 EZH1Q92800 747 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-201ENST00000322507 NARFQ9UHQ1 456 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 SLC12A4Q9UP95 1085 aa10.02□□□□□ -0.8
COL12A1-201ENST00000322507 ATP12AP54707 1039 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 RBP5P82980 135 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 DOK7Q18PE1 504 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 C2orf69Q8N8R5 385 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 TLR2O60603 784 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 TRIM28Q13263 835 aaKnown RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 CCDC71Q8IV32 467 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 TMEM47Q9BQJ4 181 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 O00370 1275 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 IFNA7P01567 189 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 ACADVLP49748 655 aa10.02□□□□□ -0.81
COL12A1-201ENST00000322507 PSMD4P55036 377 aaKnown RBP10.02□□□□□ -0.81
COL12A1-201ENST00000322507 OSCP1Q8WVF1 389 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms