RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 KIF11P52732 1056 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 ZNF132P52740 706 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 VCPP55072 806 aaKnown RBP20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 SLC7A9P82251 487 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 BST2Q10589 180 aaKnown RBP20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 MTF1Q14872 753 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 TPRG1Q6ZUI0 275 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 PIGZQ86VD9 579 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 TTC16Q8NEE8 873 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 SH3RF2Q8TEC5 729 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 ZFYVE19Q96K21 471 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 CNTN6Q9UQ52 1028 aa20.93■□□□□ 0.94
HIGD1A-201ENST00000321331 KANSL1LA0AUZ9 987 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 MAN2B1O00754 1011 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 XPO1O14980 1071 aaKnown RBP20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 SETSIPP0DME0 302 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 GLULP15104 373 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 TCF3P15923 654 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 MLLT6P55198 1093 aaPredicted RBP20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 PDE4CQ08493 712 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 ZNF77Q15935 545 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 CNGA2Q16280 664 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 GJB7Q6PEY0 223 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 LCLAT1Q6UWP7 414 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 ZNF852Q6ZMS4 543 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 DDX23Q9BUQ8 820 aaKnown RBP20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 NACA2Q9H009 215 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 RNF38Q9H0F5 515 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 TAB2Q9NYJ8 693 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 MRPS17Q9Y2R5 130 aaKnown RBP20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 PIAS3Q9Y6X2 628 aa20.92■□□□□ 0.94
HIGD1A-201ENST00000321331 TICRRQ7Z2Z1 1910 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 CYP26A1O43174 497 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 MBL2P11226 248 aaPredicted RBP20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 PSEN1P49768 467 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 KPNA1P52294 538 aaPredicted RBP20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 USP4Q13107 963 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 ARHGAP44Q17R89 818 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 ANO6Q4KMQ2 910 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 SMYD5Q6GMV2 418 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 C1orf228Q6PIY5 440 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 CCDC186Q7Z3E2 898 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 TMEM105Q8N8V8 129 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 UBA3Q8TBC4 463 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 TFAP2BQ92481 460 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 MSANTD3Q96H12 275 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 PRRX2Q99811 253 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 FAM83CQ9BQN1 747 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 KCNH6Q9H252 994 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 C8orf33Q9H7E9 229 aaPredicted RBP20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 LRRC4Q9HBW1 653 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 GKN1Q9NS71 199 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 SIT1Q9Y3P8 196 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 CPQQ9Y646 472 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 USP3Q9Y6I4 520 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 MYO16Q9Y6X6 1858 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 ZNF318Q5VUA4 2279 aa20.91■□□□□ 0.94
HIGD1A-201ENST00000321331 COCHO43405 550 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 BRD2P25440 801 aaKnown RBP20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 NUBP1P53384 320 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 PDGFRLQ15198 375 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 KRT31Q15323 416 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 DDX42Q86XP3 938 aaKnown RBP eCLIP20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 PJA1Q8NG27 643 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 RIN3Q8TB24 985 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 NELL2Q99435 816 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 VPS16Q9H269 839 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 CCSER2Q9H7U1 834 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 GTSE1Q9NYZ3 720 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 HELZP42694 1942 aaKnown RBP20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 KMT2EQ8IZD2 1858 aa20.9■□□□□ 0.94
HIGD1A-201ENST00000321331 M0QYV0 167 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 LEFTY2O00292 366 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 TLR5O60602 858 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 CDK11BP21127 795 aaKnown RBP20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 USP8P40818 1118 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 PLA2G4AP47712 749 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 IFNAR2P48551 515 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 TKTL1P51854 596 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 APBA1Q02410 837 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 UBXN2BQ14CS0 331 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 ITPRIPL2Q3MIP1 535 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 RAB41Q5JT25 222 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 FKBP15Q5T1M5 1219 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 ARHGAP18Q8N392 663 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 KIAA1958Q8N8K9 716 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 OSCP1Q8WVF1 389 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 BPIFA3Q9BQP9 254 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 OSBPL6Q9BZF3 934 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 FOXQ1Q9C009 403 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 LTB4R2Q9NPC1 389 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 SIX2Q9NPC8 291 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 CYLDQ9NQC7 956 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 DUS2Q9NX74 493 aaKnown RBP20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 SMPD4Q9NXE4 827 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 NAGPAQ9UK23 515 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 DNAJC12Q9UKB3 198 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 COL4A2P08572 1712 aa20.89■□□□□ 0.93
HIGD1A-201ENST00000321331 KIF26AQ9ULI4 1882 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms