RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RBP3P10745 1247 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 SETD9Q8NE22 299 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 STARD13Q9Y3M8 1113 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM200BP0CF97 657 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 EPHA7Q15375 998 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 KIAA0408Q6ZU52 694 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 MOSPD2Q8NHP6 518 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 RABGEF1Q9UJ41 708 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM220BPB1ANY3 271 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 GDPD5Q8WTR4 605 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 ACOT2P49753 483 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 ZFYVE1Q9HBF4 777 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 SLC2A3P11169 496 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 WARSP23381 471 aaKnown RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 HARS2P49590 506 aaKnown RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 PGS1Q32NB8 556 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 C11orf96Q7Z7L8 435 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 ZNF184Q99676 751 aaPredicted RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 ETAA1Q9NY74 926 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 DDX20Q9UHI6 824 aaKnown RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 ZC3H13Q5T200 1668 aaKnown RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 MYL12AP19105 171 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 RGS7P49802 495 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 PDPK2PQ6A1A2 396 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 MEI4A8MW99 385 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 SMNDC1O75940 238 aaKnown RBP eCLIP17.41■□□□□ 0.387e-8■□□□□ 8.7
SMCHD1-201ENST00000320876 PCSK1P29120 753 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 STX4Q12846 297 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 SNX30Q5VWJ9 437 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 MIER2Q8N344 545 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM118BQ9BPY3 351 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 MKNK1Q9BUB5 465 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 PRR23AA6NEV1 266 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 DPF2Q92785 391 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 PHF20Q9BVI0 1012 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 RUVBL2Q9Y230 463 aaKnown RBP17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 VPS26AO75436 327 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 PDHBP11177 359 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 ALFQ53S48 1182 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 GTF2A1LQ9UNN4 478 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 AGAP1Q9UPQ3 857 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 MAPKAPK2P49137 400 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 CCDC153Q494R4 210 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 DEFB107AQ8IZN7 70 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 PNPLA7Q6ZV29 1317 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 NFYCQ13952 458 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 CDC73Q6P1J9 531 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 ZNF483Q8TF39 744 aaPredicted RBP17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 ERGIC2Q96RQ1 377 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 VAV3Q9UKW4 847 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 PHGDHO43175 533 aaKnown RBP17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 ACTRT1Q8TDG2 376 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■□□ 15.6
SMCHD1-201ENST00000320876 CRLS1Q9UJA2 301 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM20BO75063 409 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 GPAT2Q6NUI2 795 aa17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 SLC13A5Q86YT5 568 aaPredicted RBP17.41■□□□□ 0.38
SMCHD1-201ENST00000320876 RARGP13631 454 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 ADARP55265 1226 aaKnown RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 FUT8Q9BYC5 575 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 ARMC7Q9H6L4 198 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 PSMB9P28065 219 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 PPP2R1BP30154 601 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 IL5RAQ01344 420 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 RAD9BQ6WBX8 426 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 PHACTR1Q9C0D0 580 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 CPVLQ9H3G5 476 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM49BQ9NUQ9 324 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 TPRKBQ9Y3C4 175 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 SNX9Q9Y5X1 595 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 MZF1P28698 734 aaPredicted RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 TRAF3Q13114 568 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 MAPK11Q15759 364 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 GOLGA7BQ2TAP0 167 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 NDUFAF6Q330K2 333 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 CIAPIN1Q6FI81 312 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 TYW3Q6IPR3 259 aaKnown RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 SDE2Q6IQ49 451 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 TMEM26Q6ZUK4 368 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 OR6Y1Q8NGX8 325 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 NOL6Q9H6R4 1146 aaKnown RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 TBX3O15119 743 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 SUPT7LO94864 414 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 RARBP10826 455 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 KLK7P49862 253 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 PPP1R10Q96QC0 940 aaKnown RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 RPRD1BQ9NQG5 326 aaKnown RBP17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 RPS6KB2Q9UBS0 482 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 NCAM1P13591 858 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 PRLRP16471 622 aa17.4■□□□□ 0.38
SMCHD1-201ENST00000320876 DENND6AQ8IWF6 608 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms