RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SPDYE4A6NLX3 237 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 CLDN5O00501 218 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 DAB1O75553 588 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 DDHD2O94830 711 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 MATKP42679 507 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 KCNJ1P48048 391 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 C15orf59Q2T9L4 293 aaPredicted RBP18.67■□□□□ 0.58
RAB39A-201ENST00000320578 OVOS1Q6IE37 1185 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 CCHCR1Q8TD31 782 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 FAM172AQ8WUF8 416 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 CFAP57Q96MR6 1250 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 CNGB3Q9NQW8 809 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 KRT82Q9NSB4 513 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 KLHL11Q9NVR0 708 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 GRHL1Q9NZI5 618 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 PCSK1NQ9UHG2 260 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 PCDHB7Q9Y5E2 793 aa18.67■□□□□ 0.58
RAB39A-201ENST00000320578 TRAPPC3O43617 180 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 LIASO43766 372 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 GRAP2O75791 330 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 AP1G2O75843 785 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 KRT10P13645 584 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 PPP1R7Q15435 360 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 ZNF280BQ86YH2 543 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 NT5C3BQ969T7 300 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 PEBP4Q96S96 227 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 SMOQ99835 787 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 DPH5Q9H2P9 285 aa18.66■□□□□ 0.58
RAB39A-201ENST00000320578 BEST1O76090 585 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 OAZ2O95190 189 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ITIH2P19823 946 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 MNX1P50219 401 aaPredicted RBP18.65■□□□□ 0.58
RAB39A-201ENST00000320578 TSPY1Q01534 308 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 KRT17Q04695 432 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ADCY2Q08462 1091 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ADIGQ0VDE8 80 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 LLGL1Q15334 1064 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 KCNT1Q5JUK3 1230 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SH3PXD2AQ5TCZ1 1133 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 BNIPLQ7Z465 357 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 PSTKQ8IV42 348 aaKnown RBP18.65■□□□□ 0.58
RAB39A-201ENST00000320578 IQCKQ8N0W5 287 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SIX6OS1Q8N1H7 587 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 CRIPAKQ8N1N5 446 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 CCDC89Q8N998 374 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ATG4AQ8WYN0 398 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 GDAP1L1Q96MZ0 367 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 FAM193BQ96PV7 902 aaPredicted RBP18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SLC2A13Q96QE2 648 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 FMO2Q99518 471 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 NEUROG2Q9H2A3 272 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SNX24Q9Y343 169 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 DCDC2CA8MYV0 355 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SYN3O14994 580 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 NOS2P35228 1153 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 RPL21P46778 160 aaKnown RBP18.65■□□□□ 0.58
RAB39A-201ENST00000320578 HDAC4P56524 1084 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 MAP3K7CLP57077 242 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 YWHAZP63104 245 aaKnown RBP18.65■□□□□ 0.58
RAB39A-201ENST00000320578 CAV1Q03135 178 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 MTMR3Q13615 1198 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 BYSLQ13895 437 aaKnown RBP18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SMTNL2Q2TAL5 461 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SLC25A52Q3SY17 297 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 KAZNQ674X7 775 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ZDHHC24Q6UX98 284 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 BBOF1Q8ND07 529 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ZMIZ2Q8NF64 920 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 SLC35B2Q8TB61 432 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 CLEC4CQ8WTT0 213 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 IRGQQ8WZA9 623 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 ART4Q93070 314 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 MYLPFQ96A32 169 aa18.65■□□□□ 0.58
RAB39A-201ENST00000320578 TSC2P49815 1807 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 GOLGA6BA6NDN3 693 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 HHLA1C9JL84 531 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 I3L4J1 428 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 PQBP1O60828 265 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 ITGAVP06756 1048 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 IBSPP21815 317 aaPredicted RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 TKTL1P51854 596 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 VCPP55072 806 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 ATP11AP98196 1134 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 YWHAHQ04917 246 aaPredicted RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 RNASELQ05823 741 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 SNX1Q13596 522 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 TFDP2Q14188 446 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 OASLQ15646 514 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 CCDC142Q17RM4 750 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 ABI1Q8IZP0 508 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 TSEN2Q8NCE0 465 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 CASD1Q96PB1 797 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 TXLNGYQ9BZA5 131 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 PRDM16Q9HAZ2 1276 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 NGRNQ9NPE2 291 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 RRN3Q9NYV6 651 aa18.64■□□□□ 0.57
RAB39A-201ENST00000320578 MTRF1LQ9UGC7 380 aaKnown RBP18.64■□□□□ 0.57
RAB39A-201ENST00000320578 APOC4-APOC2K7ER74 178 aa18.63■□□□□ 0.57
RAB39A-201ENST00000320578 NDC80O14777 642 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms