RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CDX4O14627 284 aaPredicted RBP15.12■□□□□ 0.01
RPP40-201ENST00000319533 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
RPP40-201ENST00000319533 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 RTN3O95197 1032 aaPredicted RBP15.12■□□□□ 0.01
RPP40-201ENST00000319533 KAT7O95251 611 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 ADH1CP00326 375 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 P2RY2P41231 377 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 TNFRSF4P43489 277 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 TNNC1P63316 161 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 BECN1Q14457 450 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 BMT2Q1RMZ1 405 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
RPP40-201ENST00000319533 ATL3Q6DD88 541 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
RPP40-201ENST00000319533 C12orf40Q86WS4 652 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 SFTPA1Q8IWL2 248 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 NUP93Q8N1F7 819 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 PHTF2Q8N3S3 785 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 ALLCQ8N6M5 410 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 IQUBQ8NA54 791 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 RDH13Q8NBN7 331 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 B3GALNT2Q8NCR0 500 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 OTUB2Q96DC9 234 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 SMPD4Q9NXE4 827 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 CFAP97Q9P2B7 532 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 CGNQ9P2M7 1197 aaKnown RBP15.12■□□□□ 0.01
RPP40-201ENST00000319533 CFAP45Q9UL16 551 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 WASF3Q9UPY6 502 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 FRYQ5TBA9 3013 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 FAM92AA1XBS5 289 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 A8MXQ7 604 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.11■□□□□ 0.01
RPP40-201ENST00000319533 SGK1O00141 431 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 CLDN5O00501 218 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 TNFRSF10BO14763 440 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 CLIC2O15247 247 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 APODP05090 189 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 ADH5P11766 374 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 CSRP1P21291 193 aaKnown RBP15.11■□□□□ 0.01
RPP40-201ENST00000319533 YWHAQP27348 245 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 GRIA2P42262 883 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 NOVA1P51513 510 aaKnown RBP15.11■□□□□ 0.01
RPP40-201ENST00000319533 CYP2J2P51589 502 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 MYL6P60660 151 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 ASIC1P78348 528 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 SPDYCQ5MJ68 293 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 EOGTQ5NDL2 527 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 SHC4Q6S5L8 630 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 PAQR9Q6ZVX9 377 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 UNC13DQ70J99 1090 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 CYP2U1Q7Z449 544 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 ETFBKMTQ8IXQ9 262 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 TXNDC5Q8NBS9 432 aaKnown RBP15.11■□□□□ 0.01
RPP40-201ENST00000319533 KCNV2Q8TDN2 545 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
RPP40-201ENST00000319533 CCDC127Q96BQ5 260 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 DHX58Q96C10 678 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 MAGEF1Q9HAY2 307 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 TMEM9BQ9NQ34 198 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 COMMD8Q9NX08 183 aa15.11■□□□□ 0.01
RPP40-201ENST00000319533 MYOFQ9NZM1 2061 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 PLXND1Q9Y4D7 1925 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 GIPC1O14908 333 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 HOXC11O43248 304 aaPredicted RBP15.1■□□□□ 0.01
RPP40-201ENST00000319533 COCHO43405 550 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 CUTAO60888 179 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 ADAM23O75077 832 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 KLF8O95600 359 aaPredicted RBP15.1■□□□□ 0.01
RPP40-201ENST00000319533 ABL1P00519 1130 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 PROS1P07225 676 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 ZDHHC11BP0C7U3 371 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 MBL2P11226 248 aaPredicted RBP15.1■□□□□ 0.01
RPP40-201ENST00000319533 CEACAM1P13688 526 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 TUBP50607 506 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 CLDN10P78369 228 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 IRX4P78413 519 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 TRPC3Q13507 836 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 PKP1Q13835 747 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 MAP7D1Q3KQU3 841 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 LY6G5CQ5SRR4 150 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 EMC10Q5UCC4 262 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 WHAMMQ8TF30 809 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 TMEM174Q8WUU8 243 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 KCNK16Q96T55 309 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 POLMQ9NP87 494 aaPredicted RBP15.1■□□□□ 0.01
RPP40-201ENST00000319533 ARHGEF4Q9NR80 690 aa15.1■□□□□ 0.01
RPP40-201ENST00000319533 TNRC6BQ9UPQ9 1833 aaKnown RBP15.1■□□□□ 0.01
RPP40-201ENST00000319533 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 PATE3B3GLJ2 98 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
RPP40-201ENST00000319533 TIE1P35590 1138 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 ME1P48163 572 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 AP3M2P53677 418 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 GAD2Q05329 585 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 HECTD3Q5T447 861 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 SH3PXD2AQ5TCZ1 1133 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 PEAR1Q5VY43 1037 aaPredicted RBP15.09■□□□□ 0.01
RPP40-201ENST00000319533 LPCAT2Q7L5N7 544 aa15.09■□□□□ 0.01
RPP40-201ENST00000319533 FAM35AQ86V20 835 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms