RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ZSCAN12O43309 604 aa16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 CLASP2O75122 1294 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 TMEM253P0C7T8 217 aa16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 TAF12Q16514 161 aa16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 TPGS2Q68CL5 300 aa16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 EDEM1Q92611 657 aa16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 ABCB6Q9NP58 842 aa16.19■□□□□ 0.18
PDLIM5-202ENST00000318007 YJEFN3A6XGL0 299 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 E7ENQ6 273 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 PLD1Q13393 1074 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 MAMLD1Q13495 774 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 C10orf76Q5T2E6 689 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 PRPF38BQ5VTL8 546 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 DCUN1D2Q6PH85 259 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 OLFML1Q6UWY5 402 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 TMEM110Q86TL2 294 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 ZSCAN30Q86W11 494 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 CPNE8Q86YQ8 564 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 NUP93Q8N1F7 819 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 ZNF564Q8TBZ8 553 aaPredicted RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 C16orf45Q96MC5 204 aaPredicted RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 ANAPC7Q9UJX3 599 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 CAPN6Q9Y6Q1 641 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 SYNJ2BP-COX16A0A087WUM0 186 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 TNFRSF10BO14763 440 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 KRT86O43790 486 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 ZBED1O96006 694 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 LRG1P02750 347 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 KRT3P12035 628 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 TNNT1P13805 278 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 TUFMP49411 452 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 DNA2P51530 1060 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 CDO1Q16878 200 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 Q7L0L9 218 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 C12orf76Q8N812 135 aaPredicted RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 C2orf15Q8WU43 125 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 HSFY1Q96LI6 401 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 COX16Q9P0S2 106 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 FBXW11Q9UKB1 542 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 STRIP2Q9ULQ0 834 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 PRRC2BQ5JSZ5 2229 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 MYO16Q9Y6X6 1858 aa16.18■□□□□ 0.18
PDLIM5-202ENST00000318007 SLC38A8A6NNN8 435 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 LINC01565O15544 149 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 RFC1P35251 1148 aaPredicted RBP16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 MAGEA11P43364 429 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 RPL10AP62906 217 aaKnown RBP16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 LILRA6Q6PI73 481 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 C3orf20Q8ND61 904 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 ADAM32Q8TC27 787 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 KCTD13Q8WZ19 329 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 RFFLQ8WZ73 363 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 MRPL38Q96DV4 380 aaKnown RBP16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 C8orf48Q96LL4 319 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 CFAP57Q96MR6 1250 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 PARVAQ9NVD7 372 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 HCFC1R1Q9NWW0 138 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 CDH22Q9UJ99 828 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 FLT3P36888 993 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 ACADSBP45954 432 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 GABRB2P47870 512 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 MRPS5P82675 430 aaKnown RBP16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 SLC6A3Q01959 620 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 TAF10Q12962 218 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 MESDQ14696 234 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 TCEAL5Q5H9L2 206 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 RAB41Q5JT25 222 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 TCEAL8Q8IYN2 117 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 TTC16Q8NEE8 873 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 STK32AQ8WU08 396 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 FBXO32Q969P5 355 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 TRIM11Q96F44 468 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 GMIPQ9P107 970 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
PDLIM5-202ENST00000318007 VCANP13611 3396 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 CYP1A2P05177 515 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 DAOAP59103 153 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 ATP11AP98196 1134 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 VEPH1Q14D04 833 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 RAB6CQ53S08 254 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 PPM1LQ5SGD2 360 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 SH3PXD2AQ5TCZ1 1133 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 TRNP1Q6NT89 227 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 VN1R2Q8NFZ6 395 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 RAB6CQ9H0N0 254 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 PACSIN2Q9UNF0 486 aaPredicted RBP16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 NAALADL1Q9UQQ1 740 aa16.16■□□□□ 0.18
PDLIM5-202ENST00000318007 A0A1W2PQH9 124 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 MYBL1P10243 752 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 NCAM1P13591 858 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 GJA1P17302 382 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 TFE3P19532 575 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 EPHB3P54753 998 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 PITX1P78337 314 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 OGDHQ02218 1023 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 ADGRE1Q14246 886 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 C15orf59Q2T9L4 293 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 DCAF6Q58WW2 860 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 PLEKHA7Q6IQ23 1121 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms