RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TFE3P19532 575 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CRADDP78560 199 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 DMPKQ09013 629 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 MGAT5Q09328 741 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PARP6Q2NL67 630 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 SV2AQ7L0J3 742 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CLVS1Q8IUQ0 354 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 KLHL23Q8NBE8 558 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 RNF169Q8NCN4 708 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 TMEM143Q96AN5 459 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 RTFDC1Q9BY42 306 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 UNC45AQ9H3U1 944 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GPRC5DQ9NZD1 345 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GABBR1Q9UBS5 961 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GMNNO75496 209 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 OSBPP22059 807 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 MAP4P27816 1152 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GNL1P36915 607 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 SLC1A1P43005 524 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 QARSP47897 775 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PSMC5P62195 406 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 AP1B1Q10567 949 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 ORC2Q13416 577 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 MTMR1Q13613 665 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 FSCBQ5H9T9 825 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GPAT2Q6NUI2 795 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PPIL6Q8IXY8 311 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 NUP93Q8N1F7 819 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GLIS1Q8NBF1 620 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 FEZF2Q8TBJ5 459 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CCDC17Q96LX7 622 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 ING2Q9H160 280 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 LIN28AQ9H9Z2 209 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 RAVER2Q9HCJ3 691 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 ATXN10Q9UBB4 475 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 MYH15Q9Y2K3 1946 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 COL4A1P02462 1669 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 ESYT2A0FGR8 921 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 SAC3D1A6NKF1 404 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PROSCO94903 275 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 GM2AP17900 193 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 YWHABP31946 246 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PSMD7P51665 324 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 DRG2P55039 364 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 NCKAP1LP55160 1127 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 RPL7AP62424 266 aaKnown RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CENPCQ03188 943 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 ITGA9Q13797 1035 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PTK6Q13882 451 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CCNG2Q16589 344 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 KIF19Q2TAC6 998 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 RALGPS1Q5JS13 557 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CDCA2Q69YH5 1023 aaPredicted RBP7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PLEKHA7Q6IQ23 1121 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 SWSAP1Q6NVH7 229 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 RCOR2Q8IZ40 523 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 VTI1AQ96AJ9 217 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 TRAPPC9Q96Q05 1148 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 TBC1D23Q9NUY8 699 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PPM1HQ9ULR3 514 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 SOX13Q9UN79 622 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 PCDHB2Q9Y5E7 798 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CEP290O15078 2479 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 CHD4Q14839 1912 aa7.82□□□□□ -1.16
CDHR3-201ENST00000317716 IQCA1LA6NCM1 817 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 E7ENQ6 273 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 GLRA2P23416 452 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 GARSP41250 739 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 SERPINB8P50452 374 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 AQP4P55087 323 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 FMO1Q01740 532 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 GAD2Q05329 585 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 MAPK11Q15759 364 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ITPRIPL1Q6GPH6 555 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 HEATR4Q86WZ0 1026 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 HPS6Q86YV9 775 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 MCOLN2Q8IZK6 566 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 GPC2Q8N158 579 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ALKBH8Q96BT7 664 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 LENG1Q96BZ8 264 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 NLRP4Q96MN2 994 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ZMAT2Q96NC0 199 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 CATSPER2Q96P56 530 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 MMP19Q99542 508 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ADNPQ9H2P0 1102 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 RIOX1Q9H6W3 641 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ZNF229Q9UJW7 825 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 ZNF180Q9UJW8 692 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 GPR75-ASB3A0A0A6YYF3 556 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 M0QYV0 167 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 C2CD2LO14523 706 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 TNNC2P02585 160 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 P4HBP07237 508 aaKnown RBP7.81□□□□□ -1.16
CDHR3-201ENST00000317716 PSMC3P17980 439 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 HUNKP57058 714 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 PLIN5Q00G26 463 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 VWA5B1Q5TIE3 1220 aa7.81□□□□□ -1.16
CDHR3-201ENST00000317716 MFSD5Q6N075 450 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms