RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SDHBP21912 280 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 MCCD1P59942 119 aaPredicted RBP18.8■□□□□ 0.6
TPM1-203ENST00000317516 ZXDBP98169 803 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 DMWDQ09019 674 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 ZNF658Q5TYW1 1059 aaPredicted RBP18.8■□□□□ 0.6
TPM1-203ENST00000317516 CEP68Q76N32 757 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 ERMP1Q7Z2K6 904 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 FILIP1Q7Z7B0 1213 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 SMYD4Q8IYR2 804 aaPredicted RBP18.8■□□□□ 0.6
TPM1-203ENST00000317516 CAMKK1Q8N5S9 505 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 C12orf29Q8N999 325 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 CYFIP2Q96F07 1278 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 HNRNPABQ99729 332 aaKnown RBP18.8■□□□□ 0.6
TPM1-203ENST00000317516 NACA2Q9H009 215 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.8■□□□□ 0.6
TPM1-203ENST00000317516 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 CFAP97Q9P2B7 532 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 DMDP11532 3685 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 E2F8A0AVK6 867 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 FAM92AA1XBS5 289 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 RETP07949 1114 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 PRCPP42785 496 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 FKBP3Q00688 224 aaKnown RBP18.79■□□□□ 0.6
TPM1-203ENST00000317516 ORC1Q13415 861 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 COBLL1Q53SF7 1204 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 ACDQ96AP0 544 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 OTUB2Q96DC9 234 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 TIGD1Q96MW7 591 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 SMOQ99835 787 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 APOBEC3GQ9HC16 384 aaKnown RBP18.79■□□□□ 0.6
TPM1-203ENST00000317516 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
TPM1-203ENST00000317516 C2orf42Q9NWW7 574 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 HMGXB4Q9UGU5 601 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 SH3BP1Q9Y3L3 701 aa18.79■□□□□ 0.6
TPM1-203ENST00000317516 COCHO43405 550 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 ADH1CP00326 375 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 ZDHHC11BP0C7U3 371 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 CD58P19256 250 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 ADORA2BP29275 332 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 MXI1P50539 228 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 STIM1Q13586 685 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 PUM1Q14671 1186 aaKnown RBP eCLIP18.78■□□□□ 0.65e-9■□□□□ 8.1
TPM1-203ENST00000317516 DHCR24Q15392 516 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 LPAL2Q16609 132 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 PKN3Q6P5Z2 889 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 SYT13Q7L8C5 426 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 ZMIZ2Q8NF64 920 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 ENGASEQ8NFI3 743 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 EEF2KMTQ96G04 330 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 FAM124BQ9H5Z6 455 aaPredicted RBP18.78■□□□□ 0.6
TPM1-203ENST00000317516 PNPLA8Q9NP80 782 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 GMIPQ9P107 970 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 USP18Q9UMW8 372 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 PCDHA5Q9Y5H7 936 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 FANCMQ8IYD8 2048 aa18.78■□□□□ 0.6
TPM1-203ENST00000317516 ZNF292O60281 2723 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 PRR5-ARHGAP8B1AHC4 643 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.6
TPM1-203ENST00000317516 LRP3O75074 770 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 CILPO75339 1184 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 BEST1O76090 585 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 ARHGAP8P85298 464 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 LMNB2Q03252 620 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 NAIF1Q69YI7 327 aaPredicted RBP18.77■□□□□ 0.6
TPM1-203ENST00000317516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.77■□□□□ 0.6
TPM1-203ENST00000317516 RPLP0P6Q8NHW5 317 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 SPATA20Q8TB22 786 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 RMDN1Q96DB5 314 aa18.77■□□□□ 0.6
TPM1-203ENST00000317516 SPTBN4Q9H254 2564 aa18.77■□□□□ 0.59
TPM1-203ENST00000317516 CYP17A1P05093 508 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 OPRD1P41143 372 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 EIF2DP41214 584 aaKnown RBP18.76■□□□□ 0.59
TPM1-203ENST00000317516 PPP1R2P41236 205 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 LRRC63Q05C16 580 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 GOLGA8FQ08AF8 430 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 GOLGA8DPQ0D2H9 430 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 PREPLQ4J6C6 727 aaPredicted RBP18.76■□□□□ 0.59
TPM1-203ENST00000317516 TCERG1LQ5VWI1 586 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 CLEC20AQ6ZU45 233 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 ELOA2Q8IYF1 753 aaPredicted RBP18.76■□□□□ 0.59
TPM1-203ENST00000317516 HEXIM2Q96MH2 286 aaKnown RBP18.76■□□□□ 0.59
TPM1-203ENST00000317516 TWNKQ96RR1 684 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 DUSP9Q99956 384 aaKnown RBP18.76■□□□□ 0.59
TPM1-203ENST00000317516 CCSER2Q9H7U1 834 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 SCML2Q9UQR0 700 aa18.76■□□□□ 0.59
TPM1-203ENST00000317516 DENND4CQ5VZ89 1909 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.75■□□□□ 0.59
TPM1-203ENST00000317516 PSMA7O14818 248 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 FOXD2O60548 495 aaPredicted RBP18.75■□□□□ 0.59
TPM1-203ENST00000317516 TLR5O60602 858 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 RPP40O75818 363 aaKnown RBP18.75■□□□□ 0.59
TPM1-203ENST00000317516 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 ACO1P21399 889 aaKnown RBP18.75■□□□□ 0.59
TPM1-203ENST00000317516 ATP5C1P36542 298 aaKnown RBP18.75■□□□□ 0.59
TPM1-203ENST00000317516 GAD2Q05329 585 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms