RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 PEBP4Q96S96 227 aa14.56□□□□□ -0.08
VAMP2-201ENST00000316509 C11orf84Q9BUA3 381 aaPredicted RBP14.56□□□□□ -0.08
VAMP2-201ENST00000316509 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.56□□□□□ -0.08
VAMP2-201ENST00000316509 FAM49BQ9NUQ9 324 aa14.56□□□□□ -0.08
VAMP2-201ENST00000316509 KLK14Q9P0G3 267 aa14.56□□□□□ -0.08
VAMP2-201ENST00000316509 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
VAMP2-201ENST00000316509 CDY2AQ9Y6F7 541 aa14.56□□□□□ -0.08
VAMP2-201ENST00000316509 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 SPTLC1O15269 473 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 RBP3P10745 1247 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 RPL9P32969 192 aaKnown RBP14.55□□□□□ -0.08
VAMP2-201ENST00000316509 CCT5P48643 541 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 ARL4CP56559 192 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 IFI35P80217 286 aaPredicted RBP14.55□□□□□ -0.08
VAMP2-201ENST00000316509 SKIDA1Q1XH10 827 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 PPP1R21Q6ZMI0 780 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 SCUBE3Q8IX30 993 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 TRPV1Q8NER1 839 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 ZNF473Q8WTR7 871 aaKnown RBP14.55□□□□□ -0.08
VAMP2-201ENST00000316509 FAM172AQ8WUF8 416 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 PRCCQ92733 491 aaPredicted RBP14.55□□□□□ -0.08
VAMP2-201ENST00000316509 FAF2Q96CS3 445 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 DUSP16Q9BY84 665 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 SAYSD1Q9NPB0 183 aa14.55□□□□□ -0.08
VAMP2-201ENST00000316509 C5orf60A6NFR6 353 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 GABRDO14764 452 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 SEPT4O43236 478 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 ZNF189O75820 626 aaPredicted RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 IFNB1P01574 187 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 CD48P09326 243 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 ZSCAN5DPP0CG00 497 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 FGFR1P11362 822 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 PECAM1P16284 738 aaPredicted RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 RPL22P35268 128 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 LHX1P48742 406 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 DYNLT1P63172 113 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 IRX5P78411 483 aaPredicted RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 ROR1Q01973 937 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 NBPF20Q3BBV1 942 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 SLC9A4Q6AI14 798 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 MRPL10Q7Z7H8 261 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 SERINC5Q86VE9 423 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 NAT8LQ8N9F0 302 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 HAUS1Q96CS2 278 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 LRRC4CQ9HCJ2 640 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 PDCD11Q14690 1871 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 CYB561D2O14569 222 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 APOL1O14791 398 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 PDGFRBP09619 1106 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 RARBP10826 455 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 PHBP35232 272 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 NR2C2P49116 596 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 RAB27AP51159 221 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 XRCC4Q13426 336 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 LONRF1Q17RB8 773 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 C15orf59Q2T9L4 293 aaPredicted RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 FOXR1Q6PIV2 292 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 SRLQ86TD4 932 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 EXOC3L1Q86VI1 746 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 GLIS1Q8NBF1 620 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 B3GALNT2Q8NCR0 500 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 UHMK1Q8TAS1 419 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 ARHGEF2Q92974 986 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 RTP4Q96DX8 246 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 DPEP3Q9H4B8 488 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 PCDH18Q9HCL0 1135 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 NGRNQ9NPE2 291 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 UBN1Q9NPG3 1134 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 PPANQ9NQ55 473 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 INTS9Q9NV88 658 aaKnown RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.54□□□□□ -0.085e-6■■■□□ 17.4
VAMP2-201ENST00000316509 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
VAMP2-201ENST00000316509 ST3GAL5Q9UNP4 418 aa14.54□□□□□ -0.08
VAMP2-201ENST00000316509 BCLAF3A2AJT9 711 aaKnown RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 E7ESA3 106 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 TULP2O00295 520 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 PTGESO14684 152 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 ZNF623O75123 536 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 GABBR2O75899 941 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 ETS1P14921 441 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 CHN1P15882 459 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 LMO2P25791 158 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 CTCFP49711 727 aaPredicted RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SOX4Q06945 474 aaPredicted RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 TAF5Q15542 800 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 DPYSL2Q16555 572 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 ANKRD20A8PQ5CZ79 823 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SCYL2Q6P3W7 929 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 DARS2Q6PI48 645 aaKnown RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 YTHDF3Q7Z739 585 aaKnown RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 ARRDC4Q8NCT1 418 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SELENOSQ9BQE4 189 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SENP6Q9GZR1 1112 aaPredicted RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SENP1Q9P0U3 644 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 PAK5Q9P286 719 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SLC24A2Q9UI40 661 aa14.53□□□□□ -0.08
VAMP2-201ENST00000316509 SMIM23A6NLE4 172 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms