RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TLK2Q86UE8 772 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 BTBD10Q9BSF8 475 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 FOXP3Q9BZS1 431 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 KANSL3Q9P2N6 904 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 GNEQ9Y223 722 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 USTQ9Y2C2 406 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 DNALI1O14645 258 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 HNRNPCL1O60812 293 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 HAUS5O94927 633 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 RPS6KA3P51812 740 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 ZNF200P98182 395 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 ZBED8Q8IZ13 594 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 TRIM4Q9C037 500 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 CDHR5Q9HBB8 845 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 PTPRHQ9HD43 1115 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 KLHL11Q9NVR0 708 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 PPME1Q9Y570 386 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 ETS1P14921 441 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 SEPT7Q16181 437 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 TSHZ1Q6ZSZ6 1077 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 EXOC8Q8IYI6 725 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 KIAA0319LQ8IZA0 1049 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 LINC01465Q8N7H1 131 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 KCNN1Q92952 543 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 C12orf65Q9H3J6 166 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 HEY2Q9UBP5 337 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 OGTO15294 1046 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 GYG2O15488 501 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 GSC2O15499 205 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 TBX10O75333 385 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 PROSCO94903 275 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 RTN3O95197 1032 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 UNGP13051 313 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 TFAMQ00059 246 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 OCRLQ01968 901 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 MCL1Q07820 350 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 FOXB2Q5VYV0 432 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 KAZNQ674X7 775 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 ZFAND2BQ8WV99 257 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 USP6NLQ92738 828 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 MCUR1Q96AQ8 359 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 IFT43Q96FT9 208 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 CGRRF1Q99675 332 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 ZFYVE28Q9HCC9 887 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 PSMC3IPQ9P2W1 217 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 CPSF3Q9UKF6 684 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 NUB1Q9Y5A7 615 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 TLL2Q9Y6L7 1015 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 ZWINTO95229 277 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 PSMG1O95456 288 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 CXCL8P10145 99 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 CETN2P41208 172 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 ARSEP51690 589 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 CAP1Q01518 475 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 SLC34A1Q06495 639 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 WDR44Q5JSH3 913 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 MPZL3Q6UWV2 235 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 RHOT1Q8IXI2 618 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 FAM81BQ96LP2 452 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 CDT1Q9H211 546 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 AVENQ9NQS1 362 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 C1orf112Q9NSG2 853 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 DNPEPQ9ULA0 475 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 ZNF148Q9UQR1 794 aa17.95■□□□□ 0.46
SCAMP4-201ENST00000316097 BANF1O75531 89 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 PIAS1O75925 651 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 CACNA2D1P54289 1103 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 NOP14P78316 857 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 GPS1Q13098 491 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 VPS52Q8N1B4 723 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 ZNF398Q8TD17 642 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 PTCD3Q96EY7 689 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 PRR11Q96HE9 360 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 ALG13Q9NP73 1137 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 A6NJR5 290 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 PI4K2BG5E9Z4 385 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 CFHP08603 1231 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 KRT10P13645 584 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 PROZP22891 400 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 AMHR2Q16671 573 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 ZFYVE27Q5T4F4 411 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 ANKMY2Q8IV38 441 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 BRSK2Q8IWQ3 736 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 WDR60Q8WVS4 1066 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 STMN2Q93045 179 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 GPBP1L1Q9HC44 474 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 FBXO6Q9NRD1 293 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 GABRQQ9UN88 632 aa17.94■□□□□ 0.46
SCAMP4-201ENST00000316097 PSTPIP1O43586 416 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 MYL3P08590 195 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 ARF4P18085 180 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 PHKA2P46019 1235 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 MYL6P60660 151 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 ZBTB16Q05516 673 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 PTP4A2Q12974 167 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 NCOA4Q13772 614 aa17.93■□□□□ 0.46
SCAMP4-201ENST00000316097 EFTUD2Q15029 972 aaKnown RBP eCLIP17.93■□□□□ 0.467e-12■■■■■ 65.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms