RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PLEKHA7Q6IQ23 1121 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 TRIM67Q6ZTA4 783 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 CRYGNQ8WXF5 182 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 GTSE1Q9NYZ3 720 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 UBP1Q9NZI7 540 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KBTBD13C9JR72 458 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PFDN6O15212 129 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 LIASO43766 372 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 SCNN1GP51170 649 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 TTC39BQ5VTQ0 682 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 TSSK1BQ9BXA7 367 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 PFDN4Q9NQP4 134 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 KRT82Q9NSB4 513 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 C20orf96Q9NUD7 363 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-201ENST00000314191 ZNF112Q9UJU3 913 aa6.43□□□□□ -1.38
PRKDC-201ENST00000314191 CCT8L1PA6NM43 557 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SIGLEC16A6NMB1 481 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 EIF4E1BA6NMX2 242 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PAMP19021 973 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ETFBP38117 255 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MON1BQ7L1V2 547 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TRPM8Q7Z2W7 1104 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SLITRK1Q96PX8 696 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 B3GNT5Q9BYG0 378 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MANSC1Q9H8J5 431 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TSR3Q9UJK0 312 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 NUDT5Q9UKK9 219 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 DUOX1Q9NRD9 1551 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TAF11Q15544 211 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 EIF1ADQ8N9N8 165 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TFAP2BQ92481 460 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 CELF6Q96J87 481 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MRPL45Q9BRJ2 306 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 FZD8Q9H461 694 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ANGPTL3Q9Y5C1 460 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 JCHAINP01591 159 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SMIM10L2AP0DMW4 78 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SMIM10L2BP0DMW5 78 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 GRM5P41594 1212 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 C1orf127Q8N9H9 656 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 C18orf25Q96B23 403 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SP110Q9HB58 689 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 USH1CQ9Y6N9 552 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 RPS6KL1Q9Y6S9 549 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 hCG_1818297A0A087WSY0 165 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 STX3Q13277 289 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ZNF235Q14590 738 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 FAM183BPQ6ZVS7 135 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 BORCS6Q96GS4 357 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 RNF157Q96PX1 679 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PPFIA2O75334 1257 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 POLBP06746 335 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 RMDN1Q96DB5 314 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SGF29Q96ES7 293 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 RGS20O76081 388 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 HMGCRP04035 888 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TPH1P17752 444 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TNFRSF8P28908 595 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SERPINB9P50453 376 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PAPOLAP51003 745 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PIGZQ86VD9 579 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TYW5A2RUC4 315 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 CLDN5O00501 218 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SPAG6O75602 509 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 IRF1P10914 325 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 NSUN2Q08J23 767 aaKnown RBP eCLIP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 DUSP28Q4G0W2 176 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 RAB44Q7Z6P3 723 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MREGQ8N565 214 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 LENG1Q96BZ8 264 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 CNTNAP2Q9UHC6 1331 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 NEMP1O14524 444 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 CYP1A1P04798 512 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 FDFT1P37268 417 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 WSCD1Q658N2 575 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 EP400NLQ6ZTU2 488 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 CPXM1Q96SM3 734 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SLC40A1Q9NP59 571 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TTLL13PA6NNM8 815 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 LHX1P48742 406 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 STX1BP61266 288 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MAP2K5Q13163 448 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 FSCN1Q16658 493 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 IL31Q6EBC2 164 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 SLC26A11Q86WA9 606 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ARID3BQ8IVW6 561 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ATPAF2Q8N5M1 289 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MSL3Q8N5Y2 521 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TRIM56Q9BRZ2 755 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 GPBP1L1Q9HC44 474 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ZBBXA8MT70 800 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 F9P00740 461 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 DPYSL3Q14195 570 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PDK1Q15118 436 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 GSDMBQ8TAX9 411 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 E2F7Q96AV8 911 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 FAM161BQ96MY7 647 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MTG1Q9BT17 334 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ZBED2Q9BTP6 218 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms