RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TTLL2Q9BWV7 592 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 RNF38Q9H0F5 515 aa8.67□□□□□ -1.02
TPM3-203ENST00000312970 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
TPM3-203ENST00000312970 SMG1Q96Q15 3661 aaKnown RBP8.67□□□□□ -1.02
TPM3-203ENST00000312970 ATG2BQ96BY7 2078 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ANAPC1Q9H1A4 1944 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 LEFTY2O00292 366 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 SLC9A3R1O14745 358 aaPredicted RBP8.66□□□□□ -1.02
TPM3-203ENST00000312970 SLC30A4O14863 429 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 AKAP3O75969 853 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 RTN3O95197 1032 aaPredicted RBP8.66□□□□□ -1.02
TPM3-203ENST00000312970 NFATC1O95644 943 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ZNF806P0C7X5 589 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 RAP1GAPP47736 663 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 CLDN10P78369 228 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ZXDBP98169 803 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 DNM1Q05193 864 aaKnown RBP8.66□□□□□ -1.02
TPM3-203ENST00000312970 TAF10Q12962 218 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 STK4Q13043 487 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 BIRC3Q13489 604 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
TPM3-203ENST00000312970 NAIF1Q69YI7 327 aaPredicted RBP8.66□□□□□ -1.02
TPM3-203ENST00000312970 SYT13Q7L8C5 426 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 SLC9A9Q8IVB4 645 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 GRAMD1CQ8IYS0 662 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 NUP93Q8N1F7 819 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 RPLP0P6Q8NHW5 317 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 PARD3BQ8TEW8 1205 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 TMEM174Q8WUU8 243 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 PAGE5Q96GU1 130 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ZC3H10Q96K80 434 aaKnown RBP8.66□□□□□ -1.02
TPM3-203ENST00000312970 B3GNT5Q9BYG0 378 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ELOVL4Q9GZR5 314 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 XYLT2Q9H1B5 865 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ARRDC1-AS1Q9H2J1 176 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ALG2Q9H553 416 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 DMAC2Q9NW81 257 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 EBF1Q9UH73 591 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 SERTAD1Q9UHV2 236 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 NME7Q9Y5B8 376 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ADGRG1Q9Y653 693 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 ITPR1Q14643 2758 aa8.66□□□□□ -1.02
TPM3-203ENST00000312970 SPAG17Q6Q759 2223 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 EML5Q05BV3 1969 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 LRRIQ3A6PVS8 624 aaPredicted RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 K7EQS6 105 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 CLDN5O00501 218 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 PDXKO00764 312 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 KLRC4O43908 158 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 GDF9O60383 454 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 APBB3O95704 486 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 OLFM2O95897 454 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 OAS1P00973 400 aaKnown RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 C4BPAP04003 597 aaKnown RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 CMA1P23946 247 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 YWHAQP27348 245 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 CASP4P49662 377 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 CACNA2D1P54289 1103 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 CDH8P55286 799 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 IFRD2Q12894 506 aaPredicted RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 NCOA4Q13772 614 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 DMC1Q14565 340 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 SGSM1Q2NKQ1 1148 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 ZNF667Q5HYK9 610 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 DNAJC14Q6Y2X3 702 aaPredicted RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 FILIP1Q7Z7B0 1213 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 KBTBD6Q86V97 674 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 DDX42Q86XP3 938 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM3-203ENST00000312970 PDZD8Q8NEN9 1154 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 PLEKHO2Q8TD55 490 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 OVCA2Q8WZ82 227 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 ACDQ96AP0 544 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 TNIP3Q96KP6 325 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 KCNK16Q96T55 309 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 ZNF518BQ9C0D4 1074 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 EXOC1Q9NV70 894 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 POLR3BQ9NW08 1133 aaPredicted RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 COMMD8Q9NX08 183 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 TBC1D14Q9P2M4 693 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 CHORDC1Q9UHD1 332 aaPredicted RBP8.65□□□□□ -1.02
TPM3-203ENST00000312970 USP25Q9UHP3 1055 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 CPQQ9Y646 472 aa8.65□□□□□ -1.02
TPM3-203ENST00000312970 ATP8B3O60423 1300 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 FLNBO75369 2602 aaKnown RBP8.64□□□□□ -1.03
TPM3-203ENST00000312970 A0A0A0MRY4 1105 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 A0A1B0GVL5 298 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 E2F8A0AVK6 867 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 IKBKBO14920 756 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 ACTN4O43707 911 aaKnown RBP8.64□□□□□ -1.03
TPM3-203ENST00000312970 RHOBTB1O94844 696 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 CLSTN1O94985 981 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 EPN2O95208 641 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 VNN1O95497 513 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 RPN1P04843 607 aaKnown RBP8.64□□□□□ -1.03
TPM3-203ENST00000312970 MYL1P05976 194 aa8.64□□□□□ -1.03
TPM3-203ENST00000312970 MBL2P11226 248 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms